RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, human

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFAIP3-211	ENST00000621150	RINT1	Q6NUQ1	792 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	C1orf186	Q6ZWK4	172 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	CCDC65	Q8IXS2	484 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	DRC7	Q8IY82	874 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	FAM133A	Q8N9E0	248 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	NOC3L	Q8WTT2	800 aa	Known RBP	13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	REEP2	Q9BRK0	252 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LXN	Q9BS40	222 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	RUSC1	Q9BVN2	902 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	BHMT2	Q9H2M3	363 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	PCDH10	Q9P2E7	1040 aa		13.74	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	NFASC	O94856	1347 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	BICDL2	A1A5D9	508 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SPATA31C2	B4DYI2	1134 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZBTB39	O15060	712 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SSB	P05455	408 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	P4HB	P07237	508 aa	Known RBP	13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ICAM3	P32942	547 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	COPB2	P35606	906 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KRT31	Q15323	416 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LRRC26	Q2I0M4	334 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	PHLDB3	Q6NSJ2	640 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	MIER3	Q7Z3K6	550 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	NLRX1	Q86UT6	975 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LRRC8A	Q8IWT6	810 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	TPH2	Q8IWU9	490 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	RDM1	Q8NG50	284 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	FGD4	Q96M96	766 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	NACC1	Q96RE7	527 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	CTAGE1	Q96RT6	745 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	MCM3AP	O60318	1980 aa		13.73	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	DNAJC25-GNG10	A0A024R161	153 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SOWAHB	A6NEL2	793 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SEPT4	O43236	478 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	TEX33	O43247	280 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SYN1	P17600	705 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ALDH5A1	P51649	535 aa	Predicted RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZNF131	P52739	623 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	GSDMD	P57764	484 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KRT76	Q01546	638 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	CNTN2	Q02246	1040 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LRMP	Q12912	555 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZNF792	Q3KQV3	632 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ARMCX5	Q6P1M9	558 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	TMC6	Q7Z403	805 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	FILIP1	Q7Z7B0	1213 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KIAA1524	Q8TCG1	905 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	PIGO	Q8TEQ8	1089 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	GDF15	Q99988	308 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KCND2	Q9NZV8	630 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	PYCARD	Q9ULZ3	195 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	DIS3	Q9Y2L1	958 aa	Known RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LRRC37A2	A6NM11	1700 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KCNJ18	B7U540	433 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	DDX39A	O00148	427 aa	Known RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	DNM1L	O00429	736 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	EEF1G	P26641	437 aa	Known RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SFN	P31947	248 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	JAK3	P52333	1124 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	CCZ1B	P86790	482 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	CCZ1	P86791	482 aa	Predicted RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LRRC63	Q05C16	580 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KCNJ12	Q14500	433 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	LRRC55	Q6ZSA7	311 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	C4orf19	Q8IY42	314 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SCFD1	Q8WVM8	642 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	CDHR1	Q96JP9	859 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	FIZ1	Q96SL8	496 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	TINF2	Q9BSI4	451 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	SRRT	Q9BXP5	876 aa	Known RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	KCTD10	Q9H3F6	313 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	ZSWIM4	Q9H7M6	989 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	PKD2L1	Q9P0L9	805 aa		13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150	DBR1	Q9UK59	544 aa	Known RBP	13.72	□□□□□ -0.21
TNFAIP3-211	ENST00000621150		A0A1W2PPC1	479 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	WDR64	B1ANS9	1081 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	RSPH10B2	B2RC85	870 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	EIF3J	O75822	258 aa	Known RBP	13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	RSPH10B	P0C881	870 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	GUCY2C	P25092	1073 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	MSN	P26038	577 aa	Known RBP	13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	COPB1	P53618	953 aa	Known RBP	13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	BMT2	Q1RMZ1	405 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	GJC2	Q5T442	439 aa	Predicted RBP	13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	MYOCD	Q8IZQ8	938 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	ANKRD35	Q8N283	1001 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	CSGALNACT2	Q8N6G5	542 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	OLFML3	Q9NRN5	406 aa		13.71	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	ITIH6	Q6UXX5	1313 aa		13.7	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	COL6A3	P12111	3177 aa		13.7	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	STBD1	O95210	358 aa		13.7	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	BMP8B	P34820	402 aa		13.7	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	HOXD13	P35453	343 aa		13.7	□□□□□ -0.22
TNFAIP3-211	ENST00000621150	QARS	P47897	775 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms