RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 LOC730098B7Z3J9 87 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 FAM86B1E9PN63 330 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 M0R2N6 131 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 IPO5O00410 1097 aaKnown RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SORBS3O60504 671 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ATP9AO75110 1047 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 LGR5O75473 907 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 GJB5O95377 273 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 PDGFBP01127 241 aaPredicted RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 FAM86B2P0C5J1 330 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 IQCF3P0C7M6 154 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SMIM10L2AP0DMW4 78 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SMIM10L2BP0DMW5 78 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SELPP16109 830 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 GCFC2P16383 781 aaKnown RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 KCNJ6P48051 423 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 CHMP4BP1P59074 171 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 WDR5P61964 334 aaKnown RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 HMGN5P82970 282 aaKnown RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SP4Q02446 784 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ITGB3BPQ13352 177 aaPredicted RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 TRIM29Q14134 588 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 HIC1Q14526 733 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 LAPTM4AQ15012 233 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 NONOQ15233 471 aaKnown RBP eCLIP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ME3Q16798 604 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 PTPROQ16827 1216 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 FAM160B1Q5W0V3 765 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ZNF746Q6NUN9 644 aaPredicted RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 TAF2Q6P1X5 1199 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 LRRC8DQ7L1W4 858 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SERINC5Q86VE9 423 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 TRIM50Q86XT4 487 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 GLG1Q92896 1179 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ZSCAN31Q96LW9 406 aaPredicted RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 LLPHQ9BRT6 129 aaKnown RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ZNF577Q9BSK1 485 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 PHF20Q9BVI0 1012 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 SH2B1Q9NRF2 756 aaPredicted RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 PKD2L1Q9P0L9 805 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ORC3Q9UBD5 711 aaPredicted RBP6.84□□□□□ -1.31
SSX4B-202ENST00000619890 UNC79Q9P2D8 2635 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 KAT6AQ92794 2004 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ZFYVE26Q68DK2 2539 aa6.84□□□□□ -1.31
SSX4B-202ENST00000619890 ASPMQ8IZT6 3477 aa6.84□□□□□ -1.32
SSX4B-202ENST00000619890 WDR81Q562E7 1941 aa6.84□□□□□ -1.32
SSX4B-202ENST00000619890 COL1A2P08123 1366 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 IGSF9BQ9UPX0 1349 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 MICAL3Q7RTP6 2002 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 MYH9P35579 1960 aaKnown RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 CCDC194A0A1B0GVG4 234 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 GSTTP1A0A1W2PQM5 241 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RRN3P2A6NIE6 340 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 NCK2O43639 380 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 EFCAB14O75071 495 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 PPFIA3O75145 1194 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 LARGE1O95461 756 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 ARP10275 920 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 CKBP12277 381 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 SFNP31947 248 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 KRT2P35908 639 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 JAK3P52333 1124 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 ACTR2P61160 394 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 DEFB103AP81534 67 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 PPFIA1Q13136 1202 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 CBX2Q14781 532 aaPredicted RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 GPNMBQ14956 572 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 NPY5RQ15761 445 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 Q4G0T1 1027 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 PRR16Q569H4 304 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 UTP14CQ5TAP6 766 aaKnown RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 MIS18BP1Q6P0N0 1132 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 PLPPR4Q7Z2D5 763 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RPAINQ86UA6 219 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RSPH3Q86UC2 560 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 KIAA2013Q8IYS2 634 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 NSUN7Q8NE18 718 aaKnown RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RDM1Q8NG50 284 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 CYP2W1Q8TAV3 490 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RASGRP4Q8TDF6 673 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 TBCKQ8TEA7 893 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 LMBR1Q8WVP7 490 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 ATP6V0A1Q93050 837 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 LENG9Q96B70 501 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 FAM167AQ96KS9 214 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RIPOR3Q96MK2 946 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 CTAGE1Q96RT6 745 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 RIT2Q99578 217 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 REPIN1Q9BWE0 567 aaKnown RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 NSUN3Q9H649 340 aaKnown RBP6.83□□□□□ -1.32
SSX4B-202ENST00000619890 TUBE1Q9UJT0 475 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 LIMCH1Q9UPQ0 1083 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 KIF3AQ9Y496 699 aa6.83□□□□□ -1.32
SSX4B-202ENST00000619890 CYP3A7-CYP3A51PA0A087WV96 503 aa6.82□□□□□ -1.32
SSX4B-202ENST00000619890 IGKV6D-21A0A0A0MT36 114 aa6.82□□□□□ -1.32
SSX4B-202ENST00000619890 MBLAC1A4D2B0 266 aaPredicted RBP6.82□□□□□ -1.32
SSX4B-202ENST00000619890 H3BNC9 293 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms