RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DYMQ7RTS9 669 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 FAM160B2Q86V87 743 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 SCYL3Q8IZE3 742 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ZIM3Q96PE6 472 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 TMEM60Q9H2L4 133 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PGAP2Q9UHJ9 254 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CAPN6Q9Y6Q1 641 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 FER1L6Q2WGJ9 1857 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ESYT3A0FGR9 886 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 TMEM88BA6NKF7 163 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 LRRC53A6NM62 1247 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CHUKO15111 745 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PMS1P54277 932 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 GUCY1A3Q02108 690 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PPARDQ03181 441 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 EHHADHQ08426 723 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 TTI2Q6NXR4 508 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PADI6Q6TGC4 694 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 NT5DC4Q86YG4 428 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 RNF10Q8N5U6 811 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ARL8AQ96BM9 186 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 EPN3Q9H201 632 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 HOMER2Q9NSB8 354 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 SMARCAL1Q9NZC9 954 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 FEM1BQ9UK73 627 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CSADQ9Y600 493 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CEP104O60308 925 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 FTCDO95954 541 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 LSP1P33241 339 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 EPHX2P34913 555 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 TECP42680 631 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CDK17Q00537 523 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 KLHL30Q0D2K2 578 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CALCRLQ16602 461 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 HDAC7Q8WUI4 952 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ERGIC2Q96RQ1 377 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CCSER1Q9C0I3 900 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ZNF408Q9H9D4 720 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 RBM12Q9NTZ6 932 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 TMOD4Q9NZQ9 345 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PLAGL2Q9UPG8 496 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 KCNK3O14649 394 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 TDP2O95551 362 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 HMGCS2P54868 508 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 MAP3K10Q02779 954 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 NEDD9Q14511 834 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 KIAA0753Q2KHM9 967 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 FIGNQ5HY92 759 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 CREG2Q8IUH2 290 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 CACNA2D3Q8IZS8 1091 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ANKS4BQ8N8V4 417 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 PRPF38AQ8NAV1 312 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ZNF280CQ8ND82 737 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 LPAR1Q92633 364 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 CCPG1Q9ULG6 757 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 SYNPO2Q9UMS6 1093 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 MYH6P13533 1939 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 RCCD1A6NED2 376 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 AGPSO00116 658 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 PLEKP08567 350 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ALAS1P13196 640 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 GBP2P32456 591 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ASIC2Q16515 512 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 LMBR1Q8WVP7 490 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 CAVIN3Q969G5 261 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ATP6V1G3Q96LB4 118 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ANO3Q9BYT9 981 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 TRIM9Q9C026 710 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ACTR5Q9H9F9 607 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 PRKAG2Q9UGJ0 569 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 MRPL11Q9Y3B7 192 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 PPP2R3BQ9Y5P8 575 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 MYH8P13535 1937 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 M0R2N6 131 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 WDR46O15213 610 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 EPB41P11171 864 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 POLR2FP61218 127 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 SKOR1P84550 965 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 GFPT1Q06210 699 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 SWT1Q5T5J6 900 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 HAUS3Q68CZ6 603 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 BTNL9Q6UXG8 535 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 NLRP14Q86W24 1093 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 IRF2BP1Q8IU81 584 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 CCDC26Q8TAB7 109 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 ZNF473Q8WTR7 871 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 KLRG1Q96E93 195 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 MTMR8Q96EF0 704 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 LSM14BQ9BX40 385 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 KIAA1683Q9H0B3 1180 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 CXorf56Q9H5V9 222 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 RPAP3Q9H6T3 665 aaPredicted RBP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 POLD4Q9HCU8 107 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 EHD2Q9NZN4 543 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 PLAAQ9Y263 795 aa7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.6□□□□□ -1.19
SRGAP3-213ENST00000618999 MYO1FO00160 1098 aa7.59□□□□□ -1.19
SRGAP3-213ENST00000618999 EVI5O60447 810 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms