RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 CXCL14O95715 111 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 EPCAMP16422 314 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 STAT5BP51692 787 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 TROAPQ12815 778 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 DSC3Q14574 896 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 TSGA10IPQ3SY00 556 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 FAM228AQ86W67 206 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 SLC39A11Q8N1S5 342 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 RIN2Q8WYP3 895 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 ACSF2Q96CM8 615 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 HOXA2O43364 376 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 ACTR2P61160 394 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 KIZQ2M2Z5 673 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 BLOC1S2Q6QNY1 142 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 TMC5Q6UXY8 1006 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 ABI1Q8IZP0 508 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 DCLK2Q8N568 766 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 JAKMIP1Q96N16 626 aaKnown RBP19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 OSMRQ99650 979 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 KCNK12Q9HB15 430 aa19.95■□□□□ 0.78
TRAPPC3-209ENST00000616395 STK25O00506 426 aa19.94■□□□□ 0.78
TRAPPC3-209ENST00000616395 MAFGO15525 162 aa19.94■□□□□ 0.78
TRAPPC3-209ENST00000616395 AUTS2Q8WXX7 1259 aa19.94■□□□□ 0.78
TRAPPC3-209ENST00000616395 RUBCNQ92622 972 aa19.94■□□□□ 0.78
TRAPPC3-209ENST00000616395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 NARSO43776 548 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 CRYBB1P53674 252 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 WTAPQ15007 396 aa19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 OTOP3Q7RTS5 596 aa19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 SLC22A17Q8WUG5 538 aa19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 RRP36Q96EU6 259 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 ZSCAN31Q96LW9 406 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 LRRC2Q9BYS8 371 aa19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 PDRG1Q9NUG6 133 aa19.93■□□□□ 0.78
TRAPPC3-209ENST00000616395 NT5C1B-RDH14C9J2C7 533 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 PRC1O43663 620 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 METAP2P50579 478 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 BMS1Q14692 1282 aaKnown RBP19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 UBE2SQ16763 222 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 RSPO4Q2I0M5 234 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 CLLU1OSQ5K130 101 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 CCDC149Q6ZUS6 474 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 RUFY3Q7L099 469 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 CABP7Q86V35 215 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 RASEFQ8IZ41 740 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 RNF169Q8NCN4 708 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 SDF4Q9BRK5 362 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 PSTPIP2Q9H939 334 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 ZSWIM6Q9HCJ5 1215 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 KCNH7Q9NS40 1196 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 CHMP5Q9NZZ3 219 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 CIZ1Q9ULV3 898 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 ZFHX4Q86UP3 3567 aa19.92■□□□□ 0.78
TRAPPC3-209ENST00000616395 DENND4AQ7Z401 1863 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 ERICH2A1L162 156 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 KRBA1A5PL33 1030 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 CFHP08603 1231 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 GPR149Q86SP6 731 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 ECHDC2Q86YB7 292 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 VPS52Q8N1B4 723 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 MYL10Q9BUA6 226 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 SPZ1Q9BXG8 430 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 ZBP1Q9H171 429 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 LY9Q9HBG7 655 aa19.91■□□□□ 0.78
TRAPPC3-209ENST00000616395 HBP1O60381 514 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 GPR32O75388 356 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 RFX1P22670 979 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 SLC26A2P50443 739 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 BCAR1P56945 870 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 FGD1P98174 961 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 CATIPQ7Z7H3 387 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 RAB11FIP4Q86YS3 637 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 IGDCC4Q8TDY8 1250 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 TCEANC2Q96MN5 208 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 WNT16Q9UBV4 365 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 SEC63Q9UGP8 760 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 PCDHA6Q9UN73 950 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 LIMCH1Q9UPQ0 1083 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 PCDHA8Q9Y5H6 950 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 NFASCO94856 1347 aa19.9■□□□□ 0.78
TRAPPC3-209ENST00000616395 SPDYE3A6NKU9 549 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZBTB42B2RXF5 422 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SH2B2O14492 632 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 ATG7O95352 703 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 VTNP04004 478 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SP9P0CG40 484 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 ALDH7A1P49419 539 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 ITGB3BPQ13352 177 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 ADCK5Q3MIX3 580 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SPECC1Q5M775 1068 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 ZC3H14Q6PJT7 736 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 TMEM173Q86WV6 379 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 HELQQ8TDG4 1101 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 TMEM169Q96HH4 297 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 MXRA8Q9BRK3 442 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SLKQ9H2G2 1235 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SFXN1Q9H9B4 322 aa19.89■□□□□ 0.77
TRAPPC3-209ENST00000616395 SH2B1Q9NRF2 756 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 474.7 ms