RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 DGKHQ86XP1 1220 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 TRIM59Q8IWR1 403 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 RPUSD2Q8IZ73 545 aaKnown RBP14.23□□□□□ -0.13
MSH6-214ENST00000616033 ACTRT1Q8TDG2 376 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 ELMO3Q96BJ8 720 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 PWWP2AQ96N64 755 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 TMEM237Q96Q45 408 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 PPP1R12CQ9BZL4 782 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 NSRP1Q9H0G5 558 aaKnown RBP14.23□□□□□ -0.13
MSH6-214ENST00000616033 STRCQ7RTU9 1775 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 CLSTN1O94985 981 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 ADCY7P51828 1080 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 TLDC1Q6P9B6 456 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 CPNE8Q86YQ8 564 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 JAMLQ86YT9 394 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 BTBD6Q96KE9 485 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 CNOT10Q9H9A5 744 aaKnown RBP14.23□□□□□ -0.13
MSH6-214ENST00000616033 ETNK1Q9HBU6 452 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 TMEM59LQ9UK28 342 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 CCDC188H7C350 402 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 DDX3XO00571 662 aaKnown RBP eCLIP14.22□□□□□ -0.137e-19■■■■■ 42.4
MSH6-214ENST00000616033 MYBP10242 640 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 PON1P27169 355 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 NT5DC3Q86UY8 548 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 ARHGEF26Q96DR7 871 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 STK17AQ9UEE5 414 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 COL1A1P02452 1464 aaPredicted RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 hCG_2014768A0A024R1R8 64 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 A0A1B0GVG6 124 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 AFPP02771 609 aaKnown RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 PSMC6P62333 389 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 LACTBP83111 547 aaPredicted RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 TTBK2Q6IQ55 1244 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 PALB2Q86YC2 1186 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 ERP44Q9BS26 406 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 MXD3Q9BW11 206 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 GANQ9H2C0 597 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 MYH3P11055 1940 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 KCPQ6ZWJ8 1503 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 SNUPNO95149 360 aaKnown RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 LDHBP07195 334 aaKnown RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 TRIM49P0CI25 452 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 TRIM49CP0CI26 452 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 TAL1P17542 331 aaPredicted RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 CYP2J2P51589 502 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 NCALDP61601 193 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 ATP11AP98196 1134 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 KIAA1755Q5JYT7 1200 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 SFR1Q86XK3 245 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 VSIG1Q86XK7 387 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 LRRC57Q8N9N7 239 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 DNAJC19Q96DA6 116 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 ZNF317Q96PQ6 595 aaPredicted RBP14.22□□□□□ -0.13
MSH6-214ENST00000616033 THAP2Q9H0W7 228 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 CCDC87Q9NVE4 849 aa14.22□□□□□ -0.13
MSH6-214ENST00000616033 TMEM120BA0PK00 339 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 SMIM24O75264 130 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 STAT1P42224 750 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 LACTB2Q53H82 288 aaPredicted RBP14.21□□□□□ -0.13
MSH6-214ENST00000616033 NSMFQ6X4W1 530 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 ARMC9Q7Z3E5 817 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 KRT35Q92764 455 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 ARHGEF2Q92974 986 aaKnown RBP14.21□□□□□ -0.13
MSH6-214ENST00000616033 PABPC3Q9H361 631 aaKnown RBP14.21□□□□□ -0.13
MSH6-214ENST00000616033 KLHL33A6NCF5 533 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 TOM1O60784 492 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 TNFAIP3P21580 790 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 RPL21P46778 160 aaKnown RBP14.21□□□□□ -0.13
MSH6-214ENST00000616033 KCTD1Q719H9 257 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 ALG3Q92685 438 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 HOOK2Q96ED9 719 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 GGA2Q9UJY4 613 aa14.21□□□□□ -0.13
MSH6-214ENST00000616033 GSTTP1A0A1W2PQM5 241 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 TCRBV7S2A1N4TA0A589 114 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 C5orf60A6NFR6 353 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 ANKRD63C9JTQ0 380 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 AKAP3O75969 853 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 STX2P32856 288 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 RFC4P35249 363 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 GJC1P36383 396 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 ADCY2Q08462 1091 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 DCAF12L1Q5VU92 463 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 LONP2Q86WA8 852 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 SRRM1Q8IYB3 904 aaKnown RBP14.21□□□□□ -0.14
MSH6-214ENST00000616033 ATP8B4Q8TF62 1192 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 ATXN2LQ8WWM7 1075 aaKnown RBP14.21□□□□□ -0.14
MSH6-214ENST00000616033 RPGRQ92834 1020 aaKnown RBP14.21□□□□□ -0.14
MSH6-214ENST00000616033 OSBPL1AQ9BXW6 950 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 AIPL1Q9NZN9 384 aa14.21□□□□□ -0.14
MSH6-214ENST00000616033 MTRF1LQ9UGC7 380 aaKnown RBP14.21□□□□□ -0.14
MSH6-214ENST00000616033 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.14
MSH6-214ENST00000616033 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
MSH6-214ENST00000616033 CHMP2AO43633 222 aa14.2□□□□□ -0.14
MSH6-214ENST00000616033 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
MSH6-214ENST00000616033 ACP6Q9NPH0 428 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms