RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 MRPL38Q96DV4 380 aaKnown RBP12□□□□□ -0.49
COL4A1-205ENST00000615732 EPSTI1Q96J88 318 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 IFIH1Q9BYX4 1025 aaKnown RBP12□□□□□ -0.49
COL4A1-205ENST00000615732 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 MUC6Q6W4X9 2439 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 H3BQ06 376 aaPredicted RBP11.99□□□□□ -0.49
COL4A1-205ENST00000615732 ACTN4O43707 911 aaKnown RBP11.99□□□□□ -0.49
COL4A1-205ENST00000615732 MARCH6O60337 910 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 ATP9AO75110 1047 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 TCF7P36402 384 aaPredicted RBP11.99□□□□□ -0.49
COL4A1-205ENST00000615732 PPFIA1Q13136 1202 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 AP3B2Q13367 1082 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 CALCRLQ16602 461 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 IQUBQ8NA54 791 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 ANO3Q9BYT9 981 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 TMEM60Q9H2L4 133 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 TUBE1Q9UJT0 475 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 RALGAPA2Q2PPJ7 1873 aa11.99□□□□□ -0.49
COL4A1-205ENST00000615732 C5orf42Q9H799 3197 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 H3BNC9 293 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 PIK3CDO00329 1044 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 CAND2O75155 1236 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 ADCY5O95622 1261 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 SLFN14P0C7P3 912 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 GNAT1P11488 350 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 GCFC2P16383 781 aaKnown RBP11.98□□□□□ -0.49
COL4A1-205ENST00000615732 KCNA2P16389 499 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 ITGB5P18084 799 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 UBA7P41226 1012 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 STAT6P42226 847 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 CLK2P49760 499 aaKnown RBP11.98□□□□□ -0.49
COL4A1-205ENST00000615732 IGBP1P78318 339 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 ADAM17P78536 824 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 PTPROQ16827 1216 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 TIGD5Q53EQ6 642 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 TCEAL5Q5H9L2 206 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 NLRX1Q86UT6 975 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 AOPEPQ8N6M6 819 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 BANK1Q8NDB2 785 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 TOP1MTQ969P6 601 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 PDLIM2Q96JY6 352 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 SAMD11Q96NU1 681 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 RAB34Q9BZG1 259 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
COL4A1-205ENST00000615732 A0A087WWV3 80 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 SPDYE3A6NKU9 549 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 FOSP01100 380 aaPredicted RBP11.97□□□□□ -0.49
COL4A1-205ENST00000615732 CHRNA1P02708 482 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 CTNNB1P35222 781 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 AFMP43652 599 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 GPM6BQ13491 265 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 COL19A1Q14993 1142 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 GRIK4Q16099 956 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 IL17AQ16552 155 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 DPCR1Q3MIW9 517 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
COL4A1-205ENST00000615732 POTEDQ86YR6 584 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 TMEM192Q8IY95 271 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 TRIML1Q8N9V2 468 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 GLG1Q92896 1179 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 GPRASP2Q96D09 838 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 PABPC5Q96DU9 382 aaKnown RBP11.97□□□□□ -0.49
COL4A1-205ENST00000615732 AK8Q96MA6 479 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 BPIFA3Q9BQP9 254 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 EHMT1Q9H9B1 1298 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 PCDHA5Q9Y5H7 936 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 PIEZO1Q92508 2521 aa11.97□□□□□ -0.49
COL4A1-205ENST00000615732 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 A0A087X0B3 334 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 GSTTP1A0A1W2PQM5 241 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 TDP2O95551 362 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 ALADP13716 330 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 ZP2Q05996 745 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 MGAT3Q09327 533 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 MTMR1Q13613 665 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 LPIN1Q14693 890 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 IQCB1Q15051 598 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
COL4A1-205ENST00000615732 FAM26DQ5JW98 314 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 ISM2Q6H9L7 571 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 XRRA1Q6P2D8 792 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 CABP7Q86V35 215 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 TEX2Q8IWB9 1127 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 DNAJB3Q8WWF6 145 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 UIMC1Q96RL1 719 aa11.96□□□□□ -0.49
COL4A1-205ENST00000615732 CCSER1Q9C0I3 900 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms