RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 ACRBPQ8NEB7 543 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 DUSP9Q99956 384 aaKnown RBP10.88□□□□□ -0.67
GGA3-221ENST00000614198 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
GGA3-221ENST00000614198 GOLGA6CA6NDK9 693 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 ENC1O14682 589 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 KIF3CO14782 793 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 TBX3O15119 743 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 GOLGA6DP0CG33 693 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 CALRP27797 417 aaKnown RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 NMT1P30419 496 aaKnown RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 KLK7P49862 253 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 ZNF157P51786 506 aaPredicted RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 ERVK-24P63145 666 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 FILIP1LQ4L180 1135 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 RINT1Q6NUQ1 792 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 SFR1Q86XK3 245 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 C2orf69Q8N8R5 385 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 ENOX1Q8TC92 643 aaKnown RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 CAPS2Q9BXY5 557 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 GOLGA6AQ9NYA3 693 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 MYO1AQ9UBC5 1043 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 TISP43B9A030 160 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
GGA3-221ENST00000614198 RDXP35241 583 aaKnown RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 ALDH5A1P51649 535 aaPredicted RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 B4GALNT4Q76KP1 1039 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 RIOX2Q8IUF8 465 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 GRIN2DO15399 1336 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 RNF225M0QZC1 329 aaPredicted RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 AGPSO00116 658 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 KCNA2P16389 499 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 HOXD13P35453 343 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 HTRA3P83110 453 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 AMPD2Q01433 879 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 NR1I3Q14994 352 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 HYIQ5T013 277 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 SPRYD7Q5W111 196 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 SWSAP1Q6NVH7 229 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 TRIM50Q86XT4 487 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 SPATS2Q86XZ4 545 aaKnown RBP10.87□□□□□ -0.67
GGA3-221ENST00000614198 TRIML1Q8N9V2 468 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 FAXDC2Q96IV6 333 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 KIFC3Q9BVG8 833 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
GGA3-221ENST00000614198 TMCO5BA8MYB1 307 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 ZNF862O60290 1169 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 CCND2P30279 289 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 MATR3P43243 847 aaKnown RBP eCLIP10.86□□□□□ -0.67
GGA3-221ENST00000614198 TRAF1Q13077 416 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 SPATA1Q5VX52 437 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 HAUS3Q68CZ6 603 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 CCDC60Q8IWA6 550 aaPredicted RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 GSPT2Q8IYD1 628 aaKnown RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 TRIM47Q96LD4 638 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 TARSL2A2RTX5 802 aaKnown RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 MYO1FO00160 1098 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 USO1O60763 962 aaKnown RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 OAZ1P54368 228 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 APBA1Q02410 837 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 KRT31Q15323 416 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 TTI2Q6NXR4 508 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 UNC13DQ70J99 1090 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 SYT2Q8N9I0 419 aaPredicted RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 NT5C3AQ9H0P0 336 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 EHMT1Q9H9B1 1298 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 GABBR1Q9UBS5 961 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 FAM170AA1A519 330 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 BACH1O14867 736 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 NEBLO76041 1014 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 GHRHRQ02643 423 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 C11orf91Q3C1V1 193 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 OTUD6BQ8N6M0 293 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 ZNF668Q96K58 619 aaPredicted RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 INPP4AQ96PE3 977 aaPredicted RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 RUFY1Q96T51 708 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 NAP1L4Q99733 375 aaKnown RBP10.86□□□□□ -0.67
GGA3-221ENST00000614198 SH3GL2Q99962 352 aa10.86□□□□□ -0.67
GGA3-221ENST00000614198 FRMPD4Q14CM0 1322 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 A6NNZ2 444 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 KIAA0754O94854 1291 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 MARK3P27448 753 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 EHHADHQ08426 723 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 RBL2Q08999 1139 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 TUBB8Q3ZCM7 444 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 WLSQ5T9L3 541 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 FASTKD5Q7L8L6 764 aaKnown RBP10.85□□□□□ -0.67
GGA3-221ENST00000614198 ZSWIM2Q8NEG5 633 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 ERMNQ8TAM6 284 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 SCFD1Q8WVM8 642 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 N4BP2L2Q92802 583 aaPredicted RBP10.85□□□□□ -0.67
GGA3-221ENST00000614198 CD248Q9HCU0 757 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 DACH1Q9UI36 760 aa10.85□□□□□ -0.67
GGA3-221ENST00000614198 A0A1B0GTH6 734 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms