RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 ZC3H3Q8IXZ2 948 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 SYCE1Q8N0S2 351 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 GANQ9H2C0 597 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 CENPHQ9H3R5 247 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 CXorf56Q9H5V9 222 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 PACSIN2Q9UNF0 486 aaPredicted RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
ATF3-211ENST00000613954 LOC102724159A0A0B4J2E5 919 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 CETN3O15182 167 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 SART1O43290 800 aaKnown RBP12.19□□□□□ -0.46
ATF3-211ENST00000613954 SLC37A4O43826 429 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 CEP104O60308 925 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 FLOT1O75955 427 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 STAT2P52630 851 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 EIF3BP55884 814 aaKnown RBP12.19□□□□□ -0.46
ATF3-211ENST00000613954 IFFO1Q0D2I5 559 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 PWP2Q15269 919 aaKnown RBP12.19□□□□□ -0.46
ATF3-211ENST00000613954 UBE2SQ16763 222 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 HOOK2Q96ED9 719 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 FAM114A2Q9NRY5 505 aa12.19□□□□□ -0.46
ATF3-211ENST00000613954 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 PLA2G6O60733 806 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 ERCC3P19447 782 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 NPEPPSP55786 919 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 ARID5AQ03989 594 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 TRAF1Q13077 416 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 NEDD9Q14511 834 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 TRADDQ15628 312 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 UAP1Q16222 522 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 PPP2R5EQ16537 467 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 CACNA2D3Q8IZS8 1091 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 LRRC57Q8N9N7 239 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 MAGEC3Q8TD91 643 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 SPAG5Q96R06 1193 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 JPH2Q9BR39 696 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 PACSIN1Q9BY11 444 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 INTUQ9ULD6 942 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 TDP2O95551 362 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 PRKCIP41743 596 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 KCNH2Q12809 1159 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 ADAM9Q13443 819 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 LACTB2Q53H82 288 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 FRMD5Q7Z6J6 570 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 GLIS3Q8NEA6 775 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 GIMAP7Q8NHV1 300 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 UBLCP1Q8WVY7 318 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 ZKSCAN4Q969J2 545 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 SLC40A1Q9NP59 571 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 SUCLA2Q9P2R7 463 aaPredicted RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 FBXL5Q9UKA1 691 aa12.18□□□□□ -0.46
ATF3-211ENST00000613954 NOC2LQ9Y3T9 749 aaKnown RBP12.18□□□□□ -0.46
ATF3-211ENST00000613954 KRIT1O00522 736 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 MARCH6O60337 910 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 SNAP25P60880 206 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 PTK2Q05397 1052 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 ZYXQ15942 572 aaKnown RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 SNCBQ16143 134 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 ALKBH5Q6P6C2 394 aaKnown RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 PEX26Q7Z412 305 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 TRPM4Q8TD43 1214 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 CENPTQ96BT3 561 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 ZNF341Q9BYN7 854 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 KCTD10Q9H3F6 313 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 NAGPAQ9UK23 515 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 FEM1BQ9UK73 627 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 DIS3Q9Y2L1 958 aaKnown RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 UTP11Q9Y3A2 253 aaKnown RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 PCDHA2Q9Y5H9 948 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
ATF3-211ENST00000613954 PITPNM2Q9BZ72 1349 aa12.17□□□□□ -0.46
ATF3-211ENST00000613954 GHRP10912 638 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms