RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 GABPB2Q8TAK5 448 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 DHX58Q96C10 678 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 PURBQ96QR8 312 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 PANX2Q96RD6 677 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 RTFDC1Q9BY42 306 aaPredicted RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 CCSER1Q9C0I3 900 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 VCX3BQ9H321 246 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 RAB6BQ9NRW1 208 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 SAMSN1Q9NSI8 373 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 ZMAT5Q9UDW3 170 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 ADD3Q9UEY8 706 aaKnown RBP7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 CIDEBQ9UHD4 219 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 TMCO1Q9UM00 188 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 PCDHGA11Q9Y5H2 935 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 PHLPP2Q6ZVD8 1323 aa7.29□□□□□ -1.24
CDKAL1-204ENST00000613575 TARSL2A2RTX5 802 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ABLIM1O14639 778 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 P4HA2O15460 535 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CYTH3O43739 400 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SMIM24O75264 130 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 BCRP11274 1271 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 RPL17P18621 184 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CNGA1P29973 690 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 INHBCP55103 352 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CLDN10P78369 228 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 PHEXP78562 749 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 BTG3Q14201 252 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 LONRF2Q1L5Z9 754 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CCDC40Q4G0X9 1142 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 PRR5LQ6MZQ0 368 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 PIK3AP1Q6ZUJ8 805 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 BZW1Q7L1Q6 419 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF804AQ7Z570 1209 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 GRAMD1CQ8IYS0 662 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 C1orf131Q8NDD1 294 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SH3RF3Q8TEJ3 882 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CRAMP1Q96RY5 1269 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TMEM47Q9BQJ4 181 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SPZ1Q9BXG8 430 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 NAA15Q9BXJ9 866 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CAPS2Q9BXY5 557 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ZMYND12Q9H0C1 365 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CCDC68Q9H2F9 335 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ATP13A2Q9NQ11 1180 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 BARHL2Q9NY43 387 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ATXN10Q9UBB4 475 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 LIMA1Q9UHB6 759 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 RWDD2AQ9UIY3 292 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 USP21Q9UK80 565 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 PCDHA6Q9UN73 950 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 DAAM1Q9Y4D1 1078 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 PCDHA8Q9Y5H6 950 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ITIH6Q6UXX5 1313 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 FAM205AQ6ZU69 1335 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 A0A1W2PRU2 124 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 VWA3AA6NCI4 1184 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TMEM110-MUSTN1A8MSY1 372 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ADAMTS3O15072 1205 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TBCAO75347 108 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 RASSF9O75901 435 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 STAU1O95793 577 aaKnown RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CCDC166P0CW27 439 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 MATR3P43243 847 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 USP5P45974 858 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CCT8P50990 548 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 GPSM2P81274 684 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SPAG1Q07617 926 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CBX3Q13185 183 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 MAP7Q14244 749 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 GRIK5Q16478 980 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 WHAMMP3Q1A5X7 153 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SH2D4BQ5SQS7 431 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF658Q5TYW1 1059 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 FAM196AQ6ZSG2 479 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 NCCRP1Q6ZVX7 275 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 C16orf86Q6ZW13 317 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TMC4Q7Z404 712 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TRIM46Q7Z4K8 759 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TEX9Q8N6V9 391 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CNBD1Q8NA66 436 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SLC43A3Q8NBI5 491 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 DYDC1Q8WWB3 177 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 RABGGTAQ92696 567 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 CCDC51Q96ER9 411 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SPOCK3Q9BQ16 436 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 SYNCQ9H7C4 482 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 VCPKMTQ9H867 229 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 ACTR5Q9H9F9 607 aaPredicted RBP7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 MKNK2Q9HBH9 465 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 KBTBD4Q9NVX7 518 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 RMND1Q9NWS8 449 aa7.28□□□□□ -1.24
CDKAL1-204ENST00000613575 DKK3Q9UBP4 350 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms