RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 ZBTB42B2RXF5 422 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 DNM1LO00429 736 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 MAGEB2O15479 319 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 KLRC4O43908 158 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 C22orf31O95567 290 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 COL6A1P12109 1028 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 GAP43P17677 238 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 KLRC1P26715 233 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 HERC4Q5GLZ8 1057 aaPredicted RBP14.2□□□□□ -0.14
PRKN-210ENST00000612540 CNNM4Q6P4Q7 775 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 SFR1Q86XK3 245 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 EXOC8Q8IYI6 725 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 LRRC71Q8N4P6 559 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 MYCT1Q8N699 235 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 RETREG2Q8NC44 543 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 KIFAP3Q92845 792 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 TMEM143Q96AN5 459 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 GSDMAQ96QA5 445 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 DHX33Q9H6R0 707 aaKnown RBP14.2□□□□□ -0.14
PRKN-210ENST00000612540 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 XPNPEP1Q9NQW7 623 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 TBC1D7Q9P0N9 293 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 TUBE1Q9UJT0 475 aa14.2□□□□□ -0.14
PRKN-210ENST00000612540 NRCAMQ92823 1304 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 PVALEFA0A1B0GWK0 134 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 A0A1W2PQ45 241 aaPredicted RBP14.19□□□□□ -0.14
PRKN-210ENST00000612540 A0A1W2PQY0 241 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 SOX1O00570 391 aaPredicted RBP14.19□□□□□ -0.14
PRKN-210ENST00000612540 GAS2O43903 313 aaKnown RBP14.19□□□□□ -0.14
PRKN-210ENST00000612540 MAFO75444 373 aaPredicted RBP14.19□□□□□ -0.14
PRKN-210ENST00000612540 GNAT1P11488 350 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 BMP8BP34820 402 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 CLCN3P51790 818 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 TYRO3Q06418 890 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 MAPK7Q13164 816 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 STX1AQ16623 288 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 FAM26FQ5R3K3 315 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 EFCAB12Q6NXP0 572 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 MTHFD1LQ6UB35 978 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 TCP11Q8WWU5 503 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 IFT74Q96LB3 600 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 CEP89Q96ST8 783 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 STARD7Q9NQZ5 370 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
PRKN-210ENST00000612540 PHF24Q9UPV7 400 aa14.19□□□□□ -0.14
PRKN-210ENST00000612540 CCDC192P0DO97 292 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 TMOD1P28289 359 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 DNM2P50570 870 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 DMP1Q13316 513 aaPredicted RBP14.18□□□□□ -0.14
PRKN-210ENST00000612540 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 KCNB1Q14721 858 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 ODR4Q5SWX8 454 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 L1TD1Q5T7N2 865 aaKnown RBP14.18□□□□□ -0.14
PRKN-210ENST00000612540 NT5DC1Q5TFE4 455 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 NFRKBQ6P4R8 1299 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 DAW1Q8N136 415 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 TRIML1Q8N9V2 468 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 SPATA20Q8TB22 786 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 PSPC1Q8WXF1 523 aaKnown RBP14.18□□□□□ -0.14
PRKN-210ENST00000612540 HPS3Q969F9 1004 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 MAP7D2Q96T17 732 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 FAM49AQ9H0Q0 323 aaPredicted RBP14.18□□□□□ -0.14
PRKN-210ENST00000612540 LARSQ9P2J5 1176 aaKnown RBP14.18□□□□□ -0.14
PRKN-210ENST00000612540 AKT3Q9Y243 479 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 GDAQ9Y2T3 454 aa14.18□□□□□ -0.14
PRKN-210ENST00000612540 A0A0U1RQG5 324 aaPredicted RBP14.17□□□□□ -0.14
PRKN-210ENST00000612540 FRMD3A2A2Y4 597 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 CCDC169A6NNP5 214 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 K7ENM7 598 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 RHOBTB3O94955 611 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 CYP2C9P11712 490 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 PLS3P13797 630 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 SYN1P17600 705 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 SARSP49591 514 aaKnown RBP14.17□□□□□ -0.14
PRKN-210ENST00000612540 PEX3P56589 373 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 NLRP12P59046 1061 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 ZNF200P98182 395 aaPredicted RBP14.17□□□□□ -0.14
PRKN-210ENST00000612540 DRP2Q13474 957 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 MORC3Q14149 939 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 IER5Q5VY09 327 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 FAM178BQ8IXR5 827 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
PRKN-210ENST00000612540 ASAP3Q8TDY4 903 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 BSNDQ8WZ55 320 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 LRCH3Q96II8 777 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 SCLT1Q96NL6 688 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 MRPL44Q9H9J2 332 aaKnown RBP14.17□□□□□ -0.14
PRKN-210ENST00000612540 SLC39A2Q9NP94 309 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 PDLIM7Q9NR12 457 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 ANO10Q9NW15 660 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 SUCLA2Q9P2R7 463 aaPredicted RBP14.17□□□□□ -0.14
PRKN-210ENST00000612540 SEL1LQ9UBV2 794 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 GTF2IRD1Q9UHL9 959 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 NOD1Q9Y239 953 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 COL6A3P12111 3177 aa14.17□□□□□ -0.14
PRKN-210ENST00000612540 LTBP2Q14767 1821 aa14.16□□□□□ -0.14
PRKN-210ENST00000612540 IGKV6-21A0A0C4DH24 114 aa14.16□□□□□ -0.14
PRKN-210ENST00000612540 LRRIQ4A6NIV6 560 aa14.16□□□□□ -0.14
PRKN-210ENST00000612540 TREHO43280 583 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms