RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
LIG4-204ENST00000611712 TAL1P17542 331 aaPredicted RBP9.38□□□□□ -0.91
LIG4-204ENST00000611712 GBP1P32455 592 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 GPC5P78333 572 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 EPHA7Q15375 998 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 SGO2Q562F6 1265 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 RINT1Q6NUQ1 792 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 SLC30A10Q6XR72 485 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 ZNF571Q7Z3V5 609 aaPredicted RBP9.38□□□□□ -0.91
LIG4-204ENST00000611712 OR2W6PQ8NHA6 318 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 PHRF1Q9P1Y6 1649 aaKnown RBP9.38□□□□□ -0.91
LIG4-204ENST00000611712 MIF4GDA9UHW6 222 aaKnown RBP9.38□□□□□ -0.91
LIG4-204ENST00000611712 THAP12O43422 761 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 ECEL1O95672 775 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 NF2P35240 595 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 EIF3BP55884 814 aaKnown RBP9.38□□□□□ -0.91
LIG4-204ENST00000611712 ALCAMQ13740 583 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 LDHDQ86WU2 507 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 METTL13Q8N6R0 699 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 AGTPBP1Q9UPW5 1226 aa9.38□□□□□ -0.91
LIG4-204ENST00000611712 GAKO14976 1311 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 PPP1R37O75864 691 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 IFNB1P01574 187 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 P4HBP07237 508 aaKnown RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 ASNSP08243 561 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 MYBL2P10244 700 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 TRPC3Q13507 836 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 MTMR1Q13613 665 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 CCDC91Q7Z6B0 441 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 CYP2W1Q8TAV3 490 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 CASKIN2Q8WXE0 1202 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 DNAJC19Q96DA6 116 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 RUNDC3BQ96NL0 473 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 APEX2Q9UBZ4 518 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 HERC5Q9UII4 1024 aaKnown RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 TRPM3Q9HCF6 1732 aaPredicted RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 KDM4FA0A1W2PPD8 638 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 LRRIQ4A6NIV6 560 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 CHRNA5P30532 468 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 PRKG1Q13976 671 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 C15orf52Q6ZUT6 534 aaKnown RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 ZFPM1Q8IX07 1006 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 BAP1Q92560 729 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 TRIM51Q9BSJ1 452 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 COL1A1P02452 1464 aaPredicted RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 SYNGAP1Q96PV0 1343 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 ATF2P15336 505 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 CD19P15391 556 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 FECHP22830 423 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 ANXA13P27216 316 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 STX2P32856 288 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 QARSP47897 775 aaKnown RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 KCNMA1Q12791 1236 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 TRIP13Q15645 432 aaPredicted RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 MOXD1Q6UVY6 613 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 ZNF662Q6ZS27 426 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 ATP6V0A1Q93050 837 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 CELF4Q9BZC1 486 aaKnown RBP9.37□□□□□ -0.91
LIG4-204ENST00000611712 BCL9LQ86UU0 1499 aa9.37□□□□□ -0.91
LIG4-204ENST00000611712 RASGRF2O14827 1237 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ZNF263O14978 683 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 PJA2O43164 708 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ATF7P17544 494 aaPredicted RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 HNRNPH3P31942 346 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 SREBF1P36956 1147 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 RWDD2BP57060 319 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ITIH3Q06033 890 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 GNPTABQ3T906 1256 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 MEI1Q5TIA1 1274 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 SLC51AQ86UW1 340 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 PLCD3Q8N3E9 789 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 GRK7Q8WTQ7 553 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ZDHHC15Q96MV8 337 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 AGPAT1Q99943 283 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 POLR3CQ9BUI4 534 aaPredicted RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 RAVER2Q9HCJ3 691 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 DNAJC17Q9NVM6 304 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 AIPL1Q9NZN9 384 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ANKFY1Q9P2R3 1169 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 BAIAP2L1Q9UHR4 511 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 KRT15P19012 456 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 AARSP49588 968 aaKnown RBP eCLIP9.36□□□□□ -0.91
LIG4-204ENST00000611712 POLGP54098 1239 aaPredicted RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 BFSP1Q12934 665 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ECM1Q16610 540 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 KAZNQ674X7 775 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 CAPN12Q6ZSI9 719 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 HAUS6Q7Z4H7 955 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 NLRP14Q86W24 1093 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 CCDC197Q8NCU1 140 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 SLC17A8Q8NDX2 589 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms