RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 MYOCDQ8IZQ8 938 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 TMEM40Q8WWA1 233 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 NLRP7Q8WX94 980 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 ATP6V0A4Q9HBG4 840 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 C1orf112Q9NSG2 853 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 MTMR10Q9NXD2 777 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 ST3GAL5Q9UNP4 418 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 COL4A3BPQ9Y5P4 624 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 MORC2Q9Y6X9 1032 aaPredicted RBP15.91■□□□□ 0.14
HDDC2-209ENST00000609477 PTPRSQ13332 1948 aa15.91■□□□□ 0.14
HDDC2-209ENST00000609477 ZBTB39O15060 712 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 RABGGTBP53611 331 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 NFX1Q12986 1120 aaKnown RBP15.9■□□□□ 0.14
HDDC2-209ENST00000609477 RESTQ13127 1097 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 DRP2Q13474 957 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 IL17AQ16552 155 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 RHPN2Q8IUC4 686 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
HDDC2-209ENST00000609477 SNX29Q8TEQ0 813 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 PIGOQ8TEQ8 1089 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 PRPF31Q8WWY3 499 aaKnown RBP15.9■□□□□ 0.14
HDDC2-209ENST00000609477 SCLT1Q96NL6 688 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 TTYH1Q9H313 450 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-209ENST00000609477 CHST12Q9NRB3 414 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 RGS18Q9NS28 235 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
HDDC2-209ENST00000609477 DAXXQ9UER7 740 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-209ENST00000609477 YBX2Q9Y2T7 364 aaKnown RBP15.9■□□□□ 0.14
HDDC2-209ENST00000609477 COL4A6Q14031 1691 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 STAG3L1P0CL83 205 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 ZSCAN20P17040 1043 aaPredicted RBP15.89■□□□□ 0.13
HDDC2-209ENST00000609477 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDDC2-209ENST00000609477 LONP1P36776 959 aaKnown RBP15.89■□□□□ 0.13
HDDC2-209ENST00000609477 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
HDDC2-209ENST00000609477 HYIQ5T013 277 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 PPP2R2DQ66LE6 453 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 POTEGQ6S5H5 508 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 SLC24A5Q71RS6 500 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 SRGAP1Q7Z6B7 1085 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 FAM228AQ86W67 206 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 NKX2-4Q9H2Z4 354 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 KIAA1024Q9UPX6 916 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 DNM3Q9UQ16 869 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 TTC3P53804 2025 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
HDDC2-209ENST00000609477 A0A087WZ62 844 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 DENND3A2RUS2 1198 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 CA3P07451 260 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 LAMTOR4Q0VGL1 99 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 TFDP1Q14186 410 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 Q7L0L9 218 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-209ENST00000609477 NPAS4Q8IUM7 802 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 CRIPAKQ8N1N5 446 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-209ENST00000609477 TMEM143Q96AN5 459 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 FDXACB1Q9BRP7 624 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-209ENST00000609477 NFKBIZQ9BYH8 718 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 TMX1Q9H3N1 280 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 ELAC1Q9H777 363 aaKnown RBP15.88■□□□□ 0.13
HDDC2-209ENST00000609477 IFT122Q9HBG6 1241 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 XPNPEP1Q9NQW7 623 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 DDX19AQ9NUU7 478 aaKnown RBP15.88■□□□□ 0.13
HDDC2-209ENST00000609477 DACT1Q9NYF0 836 aa15.88■□□□□ 0.13
HDDC2-209ENST00000609477 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 EYA4O95677 639 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 CYP11B2P19099 503 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 ARL2P36404 184 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 SARSP49591 514 aaKnown RBP15.87■□□□□ 0.13
HDDC2-209ENST00000609477 FAM189BP81408 668 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 BECN1Q14457 450 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 DSC3Q14574 896 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 PADI6Q6TGC4 694 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-209ENST00000609477 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 SAMD11Q96NU1 681 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 PPP1R16BQ96T49 567 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 ADAM2Q99965 735 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 TRAIPQ9BWF2 469 aa15.87■□□□□ 0.13
HDDC2-209ENST00000609477 C9IYK1 514 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 SKIP12755 728 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 MYOGP15173 224 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 UBA7P41226 1012 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 PHKA2P46019 1235 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 TAP1Q03518 808 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 PTPAQ15257 358 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 ECM1Q16610 540 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 LINC01599Q8WXQ3 324 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 NLRP4Q96MN2 994 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 ZNF396Q96N95 335 aaPredicted RBP15.86■□□□□ 0.13
HDDC2-209ENST00000609477 MMTAG2Q9BU76 263 aaKnown RBP15.86■□□□□ 0.13
HDDC2-209ENST00000609477 TIPINQ9BVW5 301 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
HDDC2-209ENST00000609477 STXBP5LQ9Y2K9 1186 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms