RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 MYOCDQ8IZQ8 938 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 MCPH1Q8NEM0 835 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 TMEM40Q8WWA1 233 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 NLRP7Q8WX94 980 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 ATP6V0A4Q9HBG4 840 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 C1orf112Q9NSG2 853 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 MTMR10Q9NXD2 777 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 ST3GAL5Q9UNP4 418 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 COL4A3BPQ9Y5P4 624 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 MORC2Q9Y6X9 1032 aaPredicted RBP15.91■□□□□ 0.14
HDDC2-206ENST00000608461 PTPRSQ13332 1948 aa15.91■□□□□ 0.14
HDDC2-206ENST00000608461 ZBTB39O15060 712 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 RABGGTBP53611 331 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 NFX1Q12986 1120 aaKnown RBP15.9■□□□□ 0.14
HDDC2-206ENST00000608461 RESTQ13127 1097 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 DRP2Q13474 957 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 IL17AQ16552 155 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 RHPN2Q8IUC4 686 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
HDDC2-206ENST00000608461 SNX29Q8TEQ0 813 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 PIGOQ8TEQ8 1089 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 PRPF31Q8WWY3 499 aaKnown RBP15.9■□□□□ 0.14
HDDC2-206ENST00000608461 SCLT1Q96NL6 688 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 TTYH1Q9H313 450 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-206ENST00000608461 CHST12Q9NRB3 414 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 RGS18Q9NS28 235 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
HDDC2-206ENST00000608461 DAXXQ9UER7 740 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-206ENST00000608461 YBX2Q9Y2T7 364 aaKnown RBP15.9■□□□□ 0.14
HDDC2-206ENST00000608461 COL4A6Q14031 1691 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 STAG3L1P0CL83 205 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 ZSCAN20P17040 1043 aaPredicted RBP15.89■□□□□ 0.13
HDDC2-206ENST00000608461 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDDC2-206ENST00000608461 LONP1P36776 959 aaKnown RBP15.89■□□□□ 0.13
HDDC2-206ENST00000608461 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
HDDC2-206ENST00000608461 HYIQ5T013 277 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 PPP2R2DQ66LE6 453 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 POTEGQ6S5H5 508 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 SLC24A5Q71RS6 500 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 SRGAP1Q7Z6B7 1085 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 FAM228AQ86W67 206 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 NKX2-4Q9H2Z4 354 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 KIAA1024Q9UPX6 916 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 DNM3Q9UQ16 869 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 TTC3P53804 2025 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
HDDC2-206ENST00000608461 A0A087WZ62 844 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 DENND3A2RUS2 1198 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 CA3P07451 260 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 LAMTOR4Q0VGL1 99 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 TFDP1Q14186 410 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 Q7L0L9 218 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-206ENST00000608461 NPAS4Q8IUM7 802 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 CRIPAKQ8N1N5 446 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-206ENST00000608461 TMEM143Q96AN5 459 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 FDXACB1Q9BRP7 624 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-206ENST00000608461 NFKBIZQ9BYH8 718 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 TMX1Q9H3N1 280 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 ELAC1Q9H777 363 aaKnown RBP15.88■□□□□ 0.13
HDDC2-206ENST00000608461 IFT122Q9HBG6 1241 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 XPNPEP1Q9NQW7 623 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 DDX19AQ9NUU7 478 aaKnown RBP15.88■□□□□ 0.13
HDDC2-206ENST00000608461 DACT1Q9NYF0 836 aa15.88■□□□□ 0.13
HDDC2-206ENST00000608461 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 EYA4O95677 639 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 CYP11B2P19099 503 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 ARL2P36404 184 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 SARSP49591 514 aaKnown RBP15.87■□□□□ 0.13
HDDC2-206ENST00000608461 FAM189BP81408 668 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 BECN1Q14457 450 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 DSC3Q14574 896 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 PADI6Q6TGC4 694 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-206ENST00000608461 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 SAMD11Q96NU1 681 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 PPP1R16BQ96T49 567 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 ADAM2Q99965 735 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 TRAIPQ9BWF2 469 aa15.87■□□□□ 0.13
HDDC2-206ENST00000608461 C9IYK1 514 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 SKIP12755 728 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 MYOGP15173 224 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 UBA7P41226 1012 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 PHKA2P46019 1235 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 TAP1Q03518 808 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 PTPAQ15257 358 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 ECM1Q16610 540 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 LINC01599Q8WXQ3 324 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 NLRP4Q96MN2 994 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 ZNF396Q96N95 335 aaPredicted RBP15.86■□□□□ 0.13
HDDC2-206ENST00000608461 MMTAG2Q9BU76 263 aaKnown RBP15.86■□□□□ 0.13
HDDC2-206ENST00000608461 TIPINQ9BVW5 301 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
HDDC2-206ENST00000608461 STXBP5LQ9Y2K9 1186 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms