RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 NLRP7Q8WX94 980 aa10.82□□□□□ -0.68
VRK3-224ENST00000601849 TCEANC2Q96MN5 208 aa10.82□□□□□ -0.68
VRK3-224ENST00000601849 MRPL9Q9BYD2 267 aaKnown RBP10.82□□□□□ -0.68
VRK3-224ENST00000601849 CWH43Q9H720 699 aa10.82□□□□□ -0.68
VRK3-224ENST00000601849 DISC1Q9NRI5 854 aa10.82□□□□□ -0.68
VRK3-224ENST00000601849 A0A0U1RQF3 1178 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 ZBTB42B2RXF5 422 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 PRPF3O43395 683 aaKnown RBP10.81□□□□□ -0.68
VRK3-224ENST00000601849 GAS7O60861 476 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 GLP2RO95838 553 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 OATP04181 439 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 CDC27P30260 824 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 CLCN3P51790 818 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 JAK3P52333 1124 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 NUBP1P53384 320 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 ITIH3Q06033 890 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 GIT2Q14161 759 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 LLGL2Q6P1M3 1020 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 BLOC1S2Q6QNY1 142 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 Q6ZUG5 572 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 TMEM169Q96HH4 297 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 RIPOR3Q96MK2 946 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 CASD1Q96PB1 797 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 RIT2Q99578 217 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 JPH2Q9BR39 696 aaPredicted RBP10.81□□□□□ -0.68
VRK3-224ENST00000601849 TEKT3Q9BXF9 490 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 GCOM2Q9BZD3 368 aaPredicted RBP10.81□□□□□ -0.68
VRK3-224ENST00000601849 CHST12Q9NRB3 414 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 STK39Q9UEW8 545 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 MUC6Q6W4X9 2439 aa10.81□□□□□ -0.68
VRK3-224ENST00000601849 FSCN2O14926 492 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 CDC45O75419 566 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 CXCL14O95715 111 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 PSMA5P28066 241 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 CIITAP33076 1130 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 MTHFRP42898 656 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 NLRP5P59047 1200 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 DSC3Q14574 896 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 PTPN21Q16825 1174 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 CENPQQ7L2Z9 268 aaPredicted RBP10.8□□□□□ -0.68
VRK3-224ENST00000601849 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 EXOC8Q8IYI6 725 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 TRIM22Q8IYM9 498 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 UBALD2Q8IYN6 164 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 LRRC71Q8N4P6 559 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 MRPL43Q8N983 215 aaKnown RBP10.8□□□□□ -0.68
VRK3-224ENST00000601849 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 CRYGNQ8WXF5 182 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 SUSD6Q92537 303 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 BRF1Q92994 677 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 CCDC136Q96JN2 1154 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
VRK3-224ENST00000601849 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
VRK3-224ENST00000601849 PCDHGC5Q9Y5F6 944 aa10.8□□□□□ -0.68
VRK3-224ENST00000601849 MYO7AQ13402 2215 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 ST18O60284 1047 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 DKC1O60832 514 aaKnown RBP eCLIP10.79□□□□□ -0.68
VRK3-224ENST00000601849 DARSP14868 501 aaKnown RBP10.79□□□□□ -0.68
VRK3-224ENST00000601849 SFPQP23246 707 aaKnown RBP eCLIP10.79□□□□□ -0.68
VRK3-224ENST00000601849 GPC3P51654 580 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 RNASELQ05823 741 aaKnown RBP10.79□□□□□ -0.68
VRK3-224ENST00000601849 MTMR3Q13615 1198 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
VRK3-224ENST00000601849 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 ATAT1Q5SQI0 421 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 LRCH2Q5VUJ6 765 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 CPLX2Q6PUV4 134 aaKnown RBP10.79□□□□□ -0.68
VRK3-224ENST00000601849 MIER3Q7Z3K6 550 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 PPFIBP1Q86W92 1011 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 PGBD4Q96DM1 585 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 JAKMIP1Q96N16 626 aaKnown RBP10.79□□□□□ -0.68
VRK3-224ENST00000601849 SLC26A6Q9BXS9 759 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 S1PR5Q9H228 398 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 ADAM7Q9H2U9 754 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 ADAMTS10Q9H324 1103 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 SH3GLB2Q9NR46 395 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 DZANK1Q9NVP4 752 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 PIEZO1Q92508 2521 aa10.79□□□□□ -0.68
VRK3-224ENST00000601849 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 CHMP2AO43633 222 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 AVPR2P30518 371 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 BCAR1P56945 870 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 PRKCEQ02156 737 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 KCNC3Q14003 757 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 XKR3Q5GH77 459 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 IER5LQ5T953 404 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
VRK3-224ENST00000601849 GLB1LQ6UWU2 654 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 LRRC55Q6ZSA7 311 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 HELQQ8TDG4 1101 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 ATOH1Q92858 354 aaPredicted RBP10.78□□□□□ -0.68
VRK3-224ENST00000601849 PHKBQ93100 1093 aa10.78□□□□□ -0.68
VRK3-224ENST00000601849 ACSF2Q96CM8 615 aaPredicted RBP10.78□□□□□ -0.68
VRK3-224ENST00000601849 FAM193BQ96PV7 902 aaPredicted RBP10.78□□□□□ -0.68
VRK3-224ENST00000601849 APOL5Q9BWW9 433 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms