RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 MTRQ99707 1265 aa17.72■□□□□ 0.43
PPFIA4-213ENST00000601609 C17orf80Q9BSJ5 609 aa17.72■□□□□ 0.43
PPFIA4-213ENST00000601609 ADAMTS10Q9H324 1103 aa17.72■□□□□ 0.43
PPFIA4-213ENST00000601609 C1orf112Q9NSG2 853 aa17.72■□□□□ 0.43
PPFIA4-213ENST00000601609 PCDHB6Q9Y5E3 794 aa17.72■□□□□ 0.43
PPFIA4-213ENST00000601609 ADGRA3Q8IWK6 1321 aa17.72■□□□□ 0.43
PPFIA4-213ENST00000601609 COL4A4P53420 1690 aaPredicted RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 ARID2Q68CP9 1835 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 A0A087WZ62 844 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 IGKV6-21A0A0C4DH24 114 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 MGEA5O60502 916 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 FGFR4P22455 802 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 SARSP49591 514 aaKnown RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 ERVK-21P61565 698 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 PAN2Q504Q3 1202 aaKnown RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 RTN4RL1Q86UN2 441 aaPredicted RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 FBXO22Q8NEZ5 403 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 TCP11Q8WWU5 503 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 PSPC1Q8WXF1 523 aaKnown RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 FDXACB1Q9BRP7 624 aaPredicted RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 PCDHB7Q9Y5E2 793 aa17.71■□□□□ 0.43
PPFIA4-213ENST00000601609 ZBTB39O15060 712 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 CSDE1O75534 798 aaKnown RBP17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 DARSP14868 501 aaKnown RBP17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 PTGDRQ13258 359 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 GRB10Q13322 594 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 SKIV2LQ15477 1246 aaKnown RBP17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 RILPL1Q5EBL4 403 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 ZNF410Q86VK4 478 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 SP7Q8TDD2 431 aaPredicted RBP17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 PIGOQ8TEQ8 1089 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 SAMD11Q96NU1 681 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 HSD17B14Q9BPX1 270 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 RAB34Q9BZG1 259 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 INO80BQ9C086 356 aaPredicted RBP17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 ATP6V0A4Q9HBG4 840 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 TUFT1Q9NNX1 390 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 COL4A3BPQ9Y5P4 624 aa17.7■□□□□ 0.42
PPFIA4-213ENST00000601609 A0A087WWV3 80 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 GAS2O43903 313 aaKnown RBP17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 CTNNB1P35222 781 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 CCT6AP40227 531 aaKnown RBP17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 TOB1P50616 345 aaPredicted RBP17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 SLC24A5Q71RS6 500 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 RGS18Q9NS28 235 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 ANKEF1Q9NU02 776 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 LRWD1Q9UFC0 647 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 TTC3P53804 2025 aa17.69■□□□□ 0.42
PPFIA4-213ENST00000601609 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 MED24O75448 989 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 DGKIO75912 1065 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 LYPLA2O95372 231 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 SRGAP2CP0DJJ0 459 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 CUL4AQ13619 759 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 SPOUT1Q5T280 376 aaKnown RBP17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 POTEGQ6S5H5 508 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 FAM43BQ6ZT52 329 aaPredicted RBP17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 CATSPER3Q86XQ3 398 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 SNX29Q8TEQ0 813 aa17.68■□□□□ 0.42
PPFIA4-213ENST00000601609 LAD1O00515 517 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 DGAT1O75907 488 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 PDCP20941 246 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 RARRES1P49788 294 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 GATMP50440 423 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 FXR2P51116 673 aaKnown RBP eCLIP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 LAMTOR4Q0VGL1 99 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 TFDP1Q14186 410 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 EPC2Q52LR7 807 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 MAEAQ7L5Y9 396 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 CMTR2Q8IYT2 770 aaKnown RBP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 RNF149Q8NC42 400 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 NACC1Q96RE7 527 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 POLR3CQ9BUI4 534 aaPredicted RBP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 RWDD3Q9Y3V2 267 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 MTCH2Q9Y6C9 303 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 COL4A6Q14031 1691 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 NLRC5Q86WI3 1866 aa17.67■□□□□ 0.42
PPFIA4-213ENST00000601609 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
PPFIA4-213ENST00000601609 TBKBP1A7MCY6 615 aa17.66■□□□□ 0.42
PPFIA4-213ENST00000601609 C9IYK1 514 aa17.66■□□□□ 0.42
PPFIA4-213ENST00000601609 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
PPFIA4-213ENST00000601609 RPA1P27694 616 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms