RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 EAF1Q96JC9 268 aaPredicted RBP11.93□□□□□ -0.5
SMG9-207ENST00000598860 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 MORF4L1Q9UBU8 362 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 A0A0G2JMZ2 1700 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 MGAMO43451 1857 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 ZSWIM8A7E2V4 1837 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 PLA2G6O60733 806 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 B3GALT4O96024 378 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 SELPP16109 830 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 IFNAR1P17181 557 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 VCAM1P19320 739 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 TFE3P19532 575 aaPredicted RBP11.92□□□□□ -0.5
SMG9-207ENST00000598860 RXRAP19793 462 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 GRK4P32298 578 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 CHRNA4P43681 627 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 CCT2P78371 535 aaKnown RBP11.92□□□□□ -0.5
SMG9-207ENST00000598860 HMGN5P82970 282 aaKnown RBP11.92□□□□□ -0.5
SMG9-207ENST00000598860 PRKCZQ05513 592 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 PPP2R3AQ06190 1150 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
SMG9-207ENST00000598860 IKBKEQ14164 716 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 ZNF423Q2M1K9 1284 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 CATSPERGQ6ZRH7 1159 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 TMTC3Q6ZXV5 915 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 SH3TC2Q8TF17 1288 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 ZNF333Q96JL9 665 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 NACC1Q96RE7 527 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
SMG9-207ENST00000598860 RBPJLQ9UBG7 517 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 MAD2L2Q9UI95 211 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 GABRQQ9UN88 632 aa11.92□□□□□ -0.5
SMG9-207ENST00000598860 C1QTNF9BB2RNN3 333 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 DLL1O00548 723 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 FLT3LGP49771 235 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 STAT2P52630 851 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 SNAP47Q5SQN1 464 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 CD163Q86VB7 1156 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 RAB11FIP4Q86YS3 637 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
SMG9-207ENST00000598860 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 PAGR1Q9BTK6 254 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 NT5C1AQ9BXI3 368 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
SMG9-207ENST00000598860 TXNRD2Q9NNW7 524 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 FEM1BQ9UK73 627 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
SMG9-207ENST00000598860 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 MYH15Q9Y2K3 1946 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 SMCHD1A6NHR9 2005 aa11.91□□□□□ -0.5
SMG9-207ENST00000598860 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
SMG9-207ENST00000598860 SOX1O00570 391 aaPredicted RBP11.9□□□□□ -0.5
SMG9-207ENST00000598860 ADCY3O60266 1144 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 GREM1O60565 184 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
SMG9-207ENST00000598860 ST3GAL1Q11201 340 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 COG2Q14746 738 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 SPICE1Q8N0Z3 855 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 KLHL23Q8NBE8 558 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 GOLM1Q8NBJ4 401 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.5
SMG9-207ENST00000598860 WASF1Q92558 559 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 KLHDC7BQ96G42 594 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 IPO9Q96P70 1041 aaKnown RBP11.9□□□□□ -0.5
SMG9-207ENST00000598860 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.5
SMG9-207ENST00000598860 PNMA2Q9UL42 364 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
SMG9-207ENST00000598860 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 C9orf172C9J069 976 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 TMEM232C9JQI7 657 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 hCG_1984214I3L0E3 225 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 PEX10O60683 326 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 ITGB2P05107 769 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 ESRRAP11474 423 aaPredicted RBP11.89□□□□□ -0.51
SMG9-207ENST00000598860 MAPK4P31152 587 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 ERVK-24P63145 666 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 UBXN2AP68543 259 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 CCNA1P78396 465 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
SMG9-207ENST00000598860 TRAF1Q13077 416 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
SMG9-207ENST00000598860 NTRK3Q16288 839 aa11.89□□□□□ -0.51
SMG9-207ENST00000598860 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
SMG9-207ENST00000598860 ZNF713Q8N859 430 aaPredicted RBP11.89□□□□□ -0.51
SMG9-207ENST00000598860 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms