RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 FBXO22Q8NEZ5 403 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 GDPD5Q8WTR4 605 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 NLRP7Q8WX94 980 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 SCLT1Q96NL6 688 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 ADAM2Q99965 735 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 SH2D3AQ9BRG2 576 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 BACH2Q9BYV9 841 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 C9IYK1 514 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 OR52Z1P0C646 297 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 POLGP54098 1239 aaPredicted RBP18.63■□□□□ 0.57
USHBP1-208ENST00000598309 DSC3Q14574 896 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 EPC2Q52LR7 807 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 SLC24A5Q71RS6 500 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 TPH2Q8IWU9 490 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 TMEM192Q8IY95 271 aa18.63■□□□□ 0.57
USHBP1-208ENST00000598309 CMTR2Q8IYT2 770 aaKnown RBP18.63■□□□□ 0.57
USHBP1-208ENST00000598309 GCOM2Q9BZD3 368 aaPredicted RBP18.63■□□□□ 0.57
USHBP1-208ENST00000598309 SUCLA2Q9P2R7 463 aaPredicted RBP18.63■□□□□ 0.57
USHBP1-208ENST00000598309 POTEMA6NI47 508 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 LINC00271P0C7V0 271 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 BTG3Q14201 252 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-208ENST00000598309 ZNF174Q15697 407 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 XKR9Q5GH70 373 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 PPM1EQ8WY54 764 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 CLP1Q92989 425 aaKnown RBP18.62■□□□□ 0.57
USHBP1-208ENST00000598309 ANKEF1Q9NU02 776 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 LRFN2Q9ULH4 789 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-208ENST00000598309 PCDHB7Q9Y5E2 793 aa18.62■□□□□ 0.57
USHBP1-208ENST00000598309 C5orf67F2Z3F1 127 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 RB1P06400 928 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 GJB2P29033 226 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 FAM189BP81408 668 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 EMC2Q15006 297 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 CCDC85BQ15834 202 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-208ENST00000598309 RHPN2Q8IUC4 686 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 MICALL1Q8N3F8 863 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
USHBP1-208ENST00000598309 TCP11Q8WWU5 503 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 PSPC1Q8WXF1 523 aaKnown RBP18.61■□□□□ 0.57
USHBP1-208ENST00000598309 ZNF668Q96K58 619 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-208ENST00000598309 INO80BQ9C086 356 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-208ENST00000598309 ELAC1Q9H777 363 aaKnown RBP18.61■□□□□ 0.57
USHBP1-208ENST00000598309 TUFT1Q9NNX1 390 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 TMEM161AQ9NX61 479 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 COL4A3BPQ9Y5P4 624 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
USHBP1-208ENST00000598309 RALGAPA2Q2PPJ7 1873 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 PRRC2BQ5JSZ5 2229 aaKnown RBP18.6■□□□□ 0.57
USHBP1-208ENST00000598309 H3BNC9 293 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 XRCC6P12956 609 aaKnown RBP eCLIP18.6■□□□□ 0.57
USHBP1-208ENST00000598309 ZSCAN20P17040 1043 aaPredicted RBP18.6■□□□□ 0.57
USHBP1-208ENST00000598309 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
USHBP1-208ENST00000598309 ERMNQ8TAM6 284 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 C11orf84Q9BUA3 381 aaPredicted RBP18.6■□□□□ 0.57
USHBP1-208ENST00000598309 PLVAPQ9BX97 442 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 THEGQ9P2T0 379 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 SMC3Q9UQE7 1217 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 TRANK1O15050 2925 aa18.6■□□□□ 0.57
USHBP1-208ENST00000598309 A0A087WZ62 844 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 DGAT1O75907 488 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 CTNNB1P35222 781 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 BMPR1AP36894 532 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 TOB1P50616 345 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-208ENST00000598309 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
USHBP1-208ENST00000598309 PTPROQ16827 1216 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 NLRP4Q96MN2 994 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 MTRQ99707 1265 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 FDXACB1Q9BRP7 624 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-208ENST00000598309 POLR3CQ9BUI4 534 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-208ENST00000598309 CHST12Q9NRB3 414 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
USHBP1-208ENST00000598309 H3BQV1 296 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 LAD1O00515 517 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 ZBTB39O15060 712 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 ASAP2O43150 1006 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 HOXA2O43364 376 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 SPATA31C1P0DKV0 1188 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 TECP42680 631 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 RARRES1P49788 294 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 GPM6BQ13491 265 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 HAUS3Q68CZ6 603 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 C4orf32Q8N8J7 132 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 ATXN2LQ8WWM7 1075 aaKnown RBP18.58■□□□□ 0.56
USHBP1-208ENST00000598309 PRPF31Q8WWY3 499 aaKnown RBP18.58■□□□□ 0.56
USHBP1-208ENST00000598309 TMEM143Q96AN5 459 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 MRPL38Q96DV4 380 aaKnown RBP18.58■□□□□ 0.56
USHBP1-208ENST00000598309 CCDC43Q96MW1 224 aaKnown RBP18.58■□□□□ 0.56
USHBP1-208ENST00000598309 ATP6V0A4Q9HBG4 840 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 IFT122Q9HBG6 1241 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 XPNPEP1Q9NQW7 623 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 MRPL42Q9Y6G3 142 aaKnown RBP18.58■□□□□ 0.56
USHBP1-208ENST00000598309 ARID2Q68CP9 1835 aa18.58■□□□□ 0.56
USHBP1-208ENST00000598309 NLRC5Q86WI3 1866 aa18.57■□□□□ 0.56
USHBP1-208ENST00000598309 MUTP22033 750 aa18.57■□□□□ 0.56
USHBP1-208ENST00000598309 RPA1P27694 616 aa18.57■□□□□ 0.56
USHBP1-208ENST00000598309 LAMTOR4Q0VGL1 99 aa18.57■□□□□ 0.56
USHBP1-208ENST00000598309 CUL4AQ13619 759 aa18.57■□□□□ 0.56
USHBP1-208ENST00000598309 MXD4Q14582 209 aaPredicted RBP18.57■□□□□ 0.56
USHBP1-208ENST00000598309 NBR1Q14596 966 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms