RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 DYMQ7RTS9 669 aa17.23■□□□□ 0.35
SMCO4-206ENST00000596676 FMR1NBQ8N0W7 255 aaPredicted RBP17.23■□□□□ 0.35
SMCO4-206ENST00000596676 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
SMCO4-206ENST00000596676 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
SMCO4-206ENST00000596676 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
SMCO4-206ENST00000596676 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
SMCO4-206ENST00000596676 POLR3FQ9H1D9 316 aaPredicted RBP17.23■□□□□ 0.35
SMCO4-206ENST00000596676 SCN5AQ14524 2016 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 KIAA0355O15063 1070 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 TNRC18O15417 2968 aaPredicted RBP17.22■□□□□ 0.35
SMCO4-206ENST00000596676 HIP1RO75146 1068 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 CSDE1O75534 798 aaKnown RBP17.22■□□□□ 0.35
SMCO4-206ENST00000596676 ZNF202O95125 648 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 ARL2P36404 184 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 MGAT3Q09327 533 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 SNW1Q13573 536 aaKnown RBP17.22■□□□□ 0.35
SMCO4-206ENST00000596676 MBTPS1Q14703 1052 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 TAF2Q6P1X5 1199 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 SV2BQ7L1I2 683 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 CDY2AQ9Y6F7 541 aa17.22■□□□□ 0.35
SMCO4-206ENST00000596676 SIP14410 1827 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 GPR32O75388 356 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 GLRA2P23416 452 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
SMCO4-206ENST00000596676 UBE2HP62256 183 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 MRPS6P82932 125 aaKnown RBP17.21■□□□□ 0.35
SMCO4-206ENST00000596676 LAMTOR4Q0VGL1 99 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 GIT2Q14161 759 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 IER5Q5VY09 327 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 DNAJC19Q96DA6 116 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 VWCEQ96DN2 955 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 REEP2Q9BRK0 252 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
SMCO4-206ENST00000596676 A0A087WZ62 844 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 TIMP1P01033 207 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 IQCF3P0C7M6 154 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 SLFN14P0C7P3 912 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 SRGAP2CP0DJJ0 459 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 RAG1P15918 1043 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 FGFR4P22455 802 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 GUCY2CP25092 1073 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 TMOD1P28289 359 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 GPC3P51654 580 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 RBL2Q08999 1139 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 TCTN1Q2MV58 587 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 LRRC8DQ7L1W4 858 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 TMEM40Q8WWA1 233 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 DDX12PQ92771 950 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 BADQ92934 168 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 NLRP4Q96MN2 994 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 OSMRQ99650 979 aa17.2■□□□□ 0.34
SMCO4-206ENST00000596676 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
SMCO4-206ENST00000596676 CELF4Q9BZC1 486 aaKnown RBP17.2■□□□□ 0.34
SMCO4-206ENST00000596676 SELPP16109 830 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 MCM4P33991 863 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 DNM2P50570 870 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 FAM160A1Q05DH4 1040 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 BFSP2Q13515 415 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 CUL4BQ13620 913 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 CAPSQ13938 189 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 FAM26DQ5JW98 314 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 RSPH3Q86UC2 560 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 MCPH1Q8NEM0 835 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 PSPC1Q8WXF1 523 aaKnown RBP17.19■□□□□ 0.34
SMCO4-206ENST00000596676 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-206ENST00000596676 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 JPH2Q9BR39 696 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-206ENST00000596676 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 COL4A3BPQ9Y5P4 624 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 TRPV2Q9Y5S1 764 aa17.19■□□□□ 0.34
SMCO4-206ENST00000596676 TET1Q8NFU7 2136 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 NBNO60934 754 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
SMCO4-206ENST00000596676 GHRP10912 638 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 CSF2RAP15509 400 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 MDM2Q00987 491 aaPredicted RBP17.18■□□□□ 0.34
SMCO4-206ENST00000596676 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 NME8Q8N427 588 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 CNNM3Q8NE01 707 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 GPT2Q8TD30 523 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 TCP11Q8WWU5 503 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 NLRP7Q8WX94 980 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 HPS3Q969F9 1004 aa17.18■□□□□ 0.34
SMCO4-206ENST00000596676 CUEDC2Q9H467 287 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms