RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 IFT88Q13099 833 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 CELF4Q9BZC1 486 aaKnown RBP17.93■□□□□ 0.46
LIG1-206ENST00000594067 OLFML3Q9NRN5 406 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 A0A0A6YYK5 440 aaPredicted RBP17.93■□□□□ 0.46
LIG1-206ENST00000594067 GOLGA6L10A6NI86 522 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 TTI1O43156 1089 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 GAP43P17677 238 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 ANXA13P27216 316 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 ACTN3Q08043 901 aaPredicted RBP17.93■□□□□ 0.46
LIG1-206ENST00000594067 RNF187Q5TA31 235 aaPredicted RBP17.93■□□□□ 0.46
LIG1-206ENST00000594067 RASGEF1CQ8N431 466 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 OLIG1Q8TAK6 271 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 VCPKMTQ9H867 229 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 PPANQ9NQ55 473 aaKnown RBP17.93■□□□□ 0.46
LIG1-206ENST00000594067 DNAJC12Q9UKB3 198 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 GTPBP10A4D1E9 387 aaKnown RBP17.92■□□□□ 0.46
LIG1-206ENST00000594067 CCDC188H7C350 402 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 SLITRK3O94933 977 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 ABCB4P21439 1286 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 CTNNA1P35221 906 aaKnown RBP17.92■□□□□ 0.46
LIG1-206ENST00000594067 SOX5P35711 763 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 DRAP1Q14919 205 aaPredicted RBP17.92■□□□□ 0.46
LIG1-206ENST00000594067 SEPT12Q8IYM1 358 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 SYCE1Q8N0S2 351 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 GMCL1P1Q8NEA9 526 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 LRRC45Q96CN5 670 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 GMCL1Q96IK5 515 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 HSD17B14Q9BPX1 270 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 WDR18Q9BV38 432 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 EP400Q96L91 3159 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 IGLV3-22A0A075B6J6 115 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 F8VZ95 297 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 GCOM1H8Y6P7 765 aaPredicted RBP17.92■□□□□ 0.46
LIG1-206ENST00000594067 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
LIG1-206ENST00000594067 GH2P01242 217 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 MYZAPP0CAP1 466 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 CYP2J2P51589 502 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 UBXN2AP68543 259 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 C1orf186Q6ZWK4 172 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 GPATCH11Q8N954 259 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 UBLCP1Q8WVY7 318 aaPredicted RBP17.92■□□□□ 0.46
LIG1-206ENST00000594067 DPH5Q9H2P9 285 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 SLC12A6Q9UHW9 1150 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 AMFRQ9UKV5 643 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 INTUQ9ULD6 942 aa17.92■□□□□ 0.46
LIG1-206ENST00000594067 BHMG1C9JSJ3 638 aaPredicted RBP17.91■□□□□ 0.46
LIG1-206ENST00000594067 TRIM49P0CI25 452 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 TRIM49CP0CI26 452 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 NPR1P16066 1061 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 FMO5P49326 533 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 OTOP1Q7RTM1 612 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 ARFGAP2Q8N6H7 521 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 SLC30A5Q8TAD4 765 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 SLC35G2Q8TBE7 412 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 CYFIP2Q96F07 1278 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 HES6Q96HZ4 224 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 IDI2Q9BXS1 227 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 BCCIPQ9P287 314 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIG1-206ENST00000594067 SIPA1L1O43166 1804 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 IGSF9BQ9UPX0 1349 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 A0A1W2PRG0 241 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 PPP1R12BO60237 982 aaPredicted RBP17.91■□□□□ 0.46
LIG1-206ENST00000594067 CFBP00751 764 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 CYP3A4P08684 503 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 SMTNP53814 917 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 ZNF844Q08AG5 666 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 CBWD6Q4V339 395 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 CBWD3Q5JTY5 395 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 CBWD5Q5RIA9 395 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 CCDC13Q8IYE1 715 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
LIG1-206ENST00000594067 PPP1R9AQ9ULJ8 1098 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 PRR12Q9ULL5 1215 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 NR2E1Q9Y466 385 aa17.91■□□□□ 0.46
LIG1-206ENST00000594067 EIF3DO15371 548 aaKnown RBP eCLIP17.9■□□□□ 0.46
LIG1-206ENST00000594067 FGGP02679 453 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 NPEPPSP55786 919 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
LIG1-206ENST00000594067 LRCH2Q5VUJ6 765 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 STK33Q9BYT3 514 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 PARVGQ9HBI0 331 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 SEPT11Q9NVA2 429 aaKnown RBP17.9■□□□□ 0.46
LIG1-206ENST00000594067 RASSF9O75901 435 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 PRPF4BQ13523 1007 aaKnown RBP17.9■□□□□ 0.46
LIG1-206ENST00000594067 ARHGAP44Q17R89 818 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 ADAT2Q7Z6V5 191 aaKnown RBP17.9■□□□□ 0.46
LIG1-206ENST00000594067 CCDC26Q8TAB7 109 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 TRIM31Q9BZY9 425 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
LIG1-206ENST00000594067 SLITRK6Q9H5Y7 841 aa17.9■□□□□ 0.46
LIG1-206ENST00000594067 GMNCA6NCL1 334 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 SETQ01105 290 aaPredicted RBP17.89■□□□□ 0.45
LIG1-206ENST00000594067 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 ARHGEF26Q96DR7 871 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 JPH2Q9BR39 696 aaPredicted RBP17.89■□□□□ 0.45
LIG1-206ENST00000594067 TRIM51Q9BSJ1 452 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 GPR88Q9GZN0 384 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 ATP8B3O60423 1300 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 KIF13BQ9NQT8 1826 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 LMNB1P20700 586 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms