RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DISC1Q9NRI5 854 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 TMEM221A6NGB7 291 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 HIDE1A8MVS5 230 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 M0R296 226 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 CHMP2AO43633 222 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 EIF4BP23588 611 aaKnown RBP18.48■□□□□ 0.55
LIG1-205ENST00000593425 GPC3P51654 580 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 ZXDAP98168 799 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 PDE12Q6L8Q7 609 aaKnown RBP18.48■□□□□ 0.55
LIG1-205ENST00000593425 KCNT2Q6UVM3 1135 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 TRIM67Q6ZTA4 783 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 ECHDC2Q86YB7 292 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 LRRC43Q8N309 656 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 CCDC148Q8NFR7 591 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 TCF25Q9BQ70 676 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 SLC26A6Q9BXS9 759 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 ENTPD7Q9NQZ7 604 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 LZTS1Q9Y250 596 aa18.48■□□□□ 0.55
LIG1-205ENST00000593425 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 HOXA2O43364 376 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 ZSCAN20P17040 1043 aaPredicted RBP18.47■□□□□ 0.55
LIG1-205ENST00000593425 ATF7P17544 494 aaPredicted RBP18.47■□□□□ 0.55
LIG1-205ENST00000593425 FGFR4P22455 802 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 TMOD1P28289 359 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 AKAP17AQ02040 695 aaKnown RBP18.47■□□□□ 0.55
LIG1-205ENST00000593425 CLLU1OSQ5K130 101 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 ANKRD54Q6NXT1 300 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 LLGL2Q6P1M3 1020 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 TMEM184AQ6ZMB5 413 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 BMP8AQ7Z5Y6 402 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 FBXL16Q8N461 479 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 RNF169Q8NCN4 708 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 BICD2Q8TD16 824 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 SLC5A5Q92911 643 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 ZNF558Q96NG5 402 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 APOL5Q9BWW9 433 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 S1PR5Q9H228 398 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 UNC45AQ9H3U1 944 aa18.47■□□□□ 0.55
LIG1-205ENST00000593425 NCOA5Q9HCD5 579 aaKnown RBP18.47■□□□□ 0.55
LIG1-205ENST00000593425 GAS7O60861 476 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 DARSP14868 501 aaKnown RBP18.46■□□□□ 0.55
LIG1-205ENST00000593425 IFNAR1P17181 557 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 TECP42680 631 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 DRP2Q13474 957 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 SYCE2Q6PIF2 218 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 ABI1Q8IZP0 508 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 PRSS33Q8NF86 280 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 NRBP2Q9NSY0 501 aa18.46■□□□□ 0.55
LIG1-205ENST00000593425 TMEM150BA6NC51 233 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 CSDE1O75534 798 aaKnown RBP18.45■□□□□ 0.54
LIG1-205ENST00000593425 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
LIG1-205ENST00000593425 TARBP2Q15633 366 aaKnown RBP18.45■□□□□ 0.54
LIG1-205ENST00000593425 LRCH2Q5VUJ6 765 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 ZNF598Q86UK7 904 aaKnown RBP18.45■□□□□ 0.54
LIG1-205ENST00000593425 HELQQ8TDG4 1101 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 PBXIP1Q96AQ6 731 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 SCLT1Q96NL6 688 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 RIT2Q99578 217 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 PUF60Q9UHX1 559 aaKnown RBP18.45■□□□□ 0.54
LIG1-205ENST00000593425 CDH22Q9UJ99 828 aa18.45■□□□□ 0.54
LIG1-205ENST00000593425 WDFY4Q6ZS81 3184 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 A0A0U1RQF3 1178 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 SRGAP2BP0DMP2 458 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 PDIA3P30101 505 aaKnown RBP18.44■□□□□ 0.54
LIG1-205ENST00000593425 SFNP31947 248 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 PPM1AP35813 382 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 USP11P51784 963 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 JAK3P52333 1124 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 TBC1D8BQ0IIM8 1120 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 IER5LQ5T953 404 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 SLC39A11Q8N1S5 342 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 TBCKQ8TEA7 893 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 CEP89Q96ST8 783 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 SH2D3AQ9BRG2 576 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 NGRNQ9NPE2 291 aaKnown RBP18.44■□□□□ 0.54
LIG1-205ENST00000593425 SPG21Q9NZD8 308 aa18.44■□□□□ 0.54
LIG1-205ENST00000593425 SEPT9Q9UHD8 586 aaPredicted RBP18.44■□□□□ 0.54
LIG1-205ENST00000593425 PSMD10O75832 226 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 STBD1O95210 358 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 TDP2O95551 362 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 SP100P23497 879 aaPredicted RBP18.43■□□□□ 0.54
LIG1-205ENST00000593425 EVCP57679 992 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 NLRP5P59047 1200 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 MTERF2Q49AM1 385 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 TMC7Q7Z402 723 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 ZNF710Q8N1W2 664 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 PHOX2BQ99453 314 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 TRIOO75962 3097 aa18.43■□□□□ 0.54
LIG1-205ENST00000593425 NT5C1B-RDH14C9J2C7 533 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 KRT17Q04695 432 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 SIGLEC14Q08ET2 396 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 Q4G0T1 1027 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 B3GNT9Q6UX72 402 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 MIER3Q7Z3K6 550 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 ASIC4Q96FT7 647 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 NIFKQ9BYG3 293 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms