RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LXNQ9BS40 222 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 PLCB1Q9NQ66 1216 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 JADE2Q9NQC1 790 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 RGL1Q9NZL6 768 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 ARHGAP20Q9P2F6 1191 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 DDX41Q9UJV9 622 aaKnown RBP10.92□□□□□ -0.66
VPS25-202ENST00000589219 GUCA1BQ9UMX6 200 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
VPS25-202ENST00000589219 ZMYM2Q9UBW7 1377 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 GTPBP10A4D1E9 387 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 CTAGE15A4D2H0 777 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 RSPH10B2B2RC85 870 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 RBAK-RBAKDNI3L0D1 243 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 NFIBO00712 420 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 NKRFO15226 690 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS25-202ENST00000589219 PJA2O43164 708 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 ATP8B1O43520 1251 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 AKR1B10O60218 316 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 TACC1O75410 805 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 FLOT1O75955 427 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 PRPF6O94906 941 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 LYPLA2O95372 231 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 P4HBP07237 508 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 RSPH10BP0C881 870 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 CTAGE8P0CG41 777 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 ARP10275 920 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 ALAS1P13196 640 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 CTGFP29279 349 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 EIF4A3P38919 411 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 CLCN6P51797 869 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 KCNMA1Q12791 1236 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 MTMR2Q13614 643 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 MYBPC2Q14324 1141 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 PAPD7Q5XG87 772 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 TMCO3Q6UWJ1 677 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 HS2ST1Q7LGA3 356 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 CTAGE6Q86UF2 777 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 CTAGE4Q8IX94 777 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 ZNF280CQ8ND82 737 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 SLAIN1Q8ND83 568 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 SYTL5Q8TDW5 730 aaPredicted RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 ALS2CR12Q96Q35 445 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 IFIH1Q9BYX4 1025 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 GANQ9H2C0 597 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 RPAP3Q9H6T3 665 aaPredicted RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 ZSWIM4Q9H7M6 989 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 AGO4Q9HCK5 861 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 TBC1D22BQ9NU19 505 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 DBR1Q9UK59 544 aaKnown RBP10.91□□□□□ -0.66
VPS25-202ENST00000589219 FBXL5Q9UKA1 691 aa10.91□□□□□ -0.66
VPS25-202ENST00000589219 CAPN2P17655 700 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 ITGB5P18084 799 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 SFNP31947 248 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 GCLCP48506 637 aaPredicted RBP10.9□□□□□ -0.66
VPS25-202ENST00000589219 JAK3P52333 1124 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 KCNH2Q12809 1159 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 SPP2Q13103 211 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 BRD3Q15059 726 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 ASIC2Q16515 512 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 TKFCQ3LXA3 575 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
VPS25-202ENST00000589219 IQCEQ6IPM2 695 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 MYCT1Q8N699 235 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 SLC17A8Q8NDX2 589 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 PIGOQ8TEQ8 1089 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
VPS25-202ENST00000589219 KCNH7Q9NS40 1196 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 COL20A1Q9P218 1284 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 TRIM10Q9UDY6 481 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 PCDHA13Q9Y5I0 950 aa10.9□□□□□ -0.66
VPS25-202ENST00000589219 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
VPS25-202ENST00000589219 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 NOL4O94818 638 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 GJB1P08034 283 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 HOXD13P35453 343 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 PSMC2P35998 433 aaKnown RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 BACE1P56817 501 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 POLR2FP61218 127 aaKnown RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 KRT76Q01546 638 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 PRKCZQ05513 592 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 MTMR1Q13613 665 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 EXOC3L4Q17RC7 722 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 ASTE1Q2TB18 679 aaPredicted RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 HGSNATQ68CP4 663 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 RNF207Q6ZRF8 634 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 SLC9A9Q8IVB4 645 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 MSANTD4Q8NCY6 345 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms