RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 DRP2Q13474 957 aa21.51■■□□□ 1.03
CIRBP-221ENST00000589161 CTTNQ14247 550 aaKnown RBP21.51■■□□□ 1.03
CIRBP-221ENST00000589161 HSD17B14Q9BPX1 270 aa21.51■■□□□ 1.03
CIRBP-221ENST00000589161 GCOM2Q9BZD3 368 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-221ENST00000589161 TTC3P53804 2025 aa21.51■■□□□ 1.03
CIRBP-221ENST00000589161 WDR81Q562E7 1941 aa21.51■■□□□ 1.03
CIRBP-221ENST00000589161 RB1P06400 928 aa21.5■■□□□ 1.03
CIRBP-221ENST00000589161 ZSCAN20P17040 1043 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-221ENST00000589161 TRAPPC10P48553 1259 aa21.5■■□□□ 1.03
CIRBP-221ENST00000589161 CMTR2Q8IYT2 770 aaKnown RBP21.5■■□□□ 1.03
CIRBP-221ENST00000589161 ZNF668Q96K58 619 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-221ENST00000589161 NOL7Q9UMY1 257 aaKnown RBP21.5■■□□□ 1.03
CIRBP-221ENST00000589161 C9IYK1 514 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 H3BNC9 293 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 LYPLA2O95372 231 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 U2AF2P26368 475 aaKnown RBP eCLIP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 BMPR1AP36894 532 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 POLGP54098 1239 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 FAM189BP81408 668 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 GPM6BQ13491 265 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 DSC3Q14574 896 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 SKIV2LQ15477 1246 aaKnown RBP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 ZNF174Q15697 407 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 PTPROQ16827 1216 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 ZNF410Q86VK4 478 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 RHPN2Q8IUC4 686 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 ATXN2LQ8WWM7 1075 aaKnown RBP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 CLP1Q92989 425 aaKnown RBP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 INO80BQ9C086 356 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 TMEM60Q9H2L4 133 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 DHX33Q9H6R0 707 aaKnown RBP21.49■■□□□ 1.03
CIRBP-221ENST00000589161 PRDM6Q9NQX0 595 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 THEGQ9P2T0 379 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 EYSQ5T1H1 3165 aa21.49■■□□□ 1.03
CIRBP-221ENST00000589161 C5orf67F2Z3F1 127 aa21.48■■□□□ 1.03
CIRBP-221ENST00000589161 DLL1O00548 723 aa21.48■■□□□ 1.03
CIRBP-221ENST00000589161 GAS2O43903 313 aaKnown RBP21.48■■□□□ 1.03
CIRBP-221ENST00000589161 CTNNB1P35222 781 aa21.48■■□□□ 1.03
CIRBP-221ENST00000589161 XKR9Q5GH70 373 aa21.48■■□□□ 1.03
CIRBP-221ENST00000589161 TTC38Q5R3I4 469 aa21.48■■□□□ 1.03
CIRBP-221ENST00000589161 ZNF579Q8NAF0 562 aaKnown RBP21.48■■□□□ 1.03
CIRBP-221ENST00000589161 ELAC1Q9H777 363 aaKnown RBP21.48■■□□□ 1.03
CIRBP-221ENST00000589161 A0A087WZ62 844 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 CD2BP2O95400 341 aaKnown RBP21.47■■□□□ 1.03
CIRBP-221ENST00000589161 IBSPP21815 317 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-221ENST00000589161 TCP11Q8WWU5 503 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 FDXACB1Q9BRP7 624 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-221ENST00000589161 C11orf84Q9BUA3 381 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-221ENST00000589161 PLVAPQ9BX97 442 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 ATP6V0A4Q9HBG4 840 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 ANKEF1Q9NU02 776 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 TMEM161AQ9NX61 479 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 LOXHD1Q8IVV2 1947 aa21.47■■□□□ 1.03
CIRBP-221ENST00000589161 PRRC2BQ5JSZ5 2229 aaKnown RBP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 ZBTB39O15060 712 aa21.46■■□□□ 1.03
CIRBP-221ENST00000589161 OR52Z1P0C646 297 aa21.46■■□□□ 1.03
CIRBP-221ENST00000589161 LINC00271P0C7V0 271 aa21.46■■□□□ 1.03
CIRBP-221ENST00000589161 XRCC6P12956 609 aaKnown RBP eCLIP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 SFPQP23246 707 aaKnown RBP eCLIP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 MRPS5P82675 430 aaKnown RBP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 PSPC1Q8WXF1 523 aaKnown RBP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 MRPL38Q96DV4 380 aaKnown RBP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 CHST12Q9NRB3 414 aa21.46■■□□□ 1.03
CIRBP-221ENST00000589161 DACT1Q9NYF0 836 aa21.46■■□□□ 1.03
CIRBP-221ENST00000589161 COL4A3BPQ9Y5P4 624 aa21.46■■□□□ 1.03
CIRBP-221ENST00000589161 MRPL42Q9Y6G3 142 aaKnown RBP21.46■■□□□ 1.03
CIRBP-221ENST00000589161 POTEMA6NI47 508 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 ASAP2O43150 1006 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 TECP42680 631 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 EMC2Q15006 297 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 PAN2Q504Q3 1202 aaKnown RBP21.45■■□□□ 1.02
CIRBP-221ENST00000589161 ERMNQ8TAM6 284 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 PRPF31Q8WWY3 499 aaKnown RBP21.45■■□□□ 1.02
CIRBP-221ENST00000589161 SYMPKQ92797 1274 aaKnown RBP21.45■■□□□ 1.02
CIRBP-221ENST00000589161 TMEM143Q96AN5 459 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 NLRP4Q96MN2 994 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 CCDC43Q96MW1 224 aaKnown RBP21.45■■□□□ 1.02
CIRBP-221ENST00000589161 TUFT1Q9NNX1 390 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 COG5Q9UP83 839 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-221ENST00000589161 PRUNE2Q8WUY3 3088 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 TRANK1O15050 2925 aa21.45■■□□□ 1.02
CIRBP-221ENST00000589161 HOXA2O43364 376 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 CSDE1O75534 798 aaKnown RBP21.44■■□□□ 1.02
CIRBP-221ENST00000589161 FGFR4P22455 802 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 GJB2P29033 226 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 AAK1Q2M2I8 961 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 NAALADL2Q58DX5 795 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 TJAP1Q5JTD0 557 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 KSR1Q8IVT5 923 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 ASB2Q96Q27 587 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 MTRQ99707 1265 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 POLR3CQ9BUI4 534 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-221ENST00000589161 BACH2Q9BYV9 841 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 LMAN2LQ9H0V9 348 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 SMC3Q9UQE7 1217 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 A0A0C4DFX4 3053 aa21.44■■□□□ 1.02
CIRBP-221ENST00000589161 UNC80Q8N2C7 3258 aa21.43■■□□□ 1.02
CIRBP-221ENST00000589161 TBKBP1A7MCY6 615 aa21.43■■□□□ 1.02
CIRBP-221ENST00000589161 H3BQV1 296 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms