RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 EIF3DO15371 548 aaKnown RBP eCLIP24.56■■□□□ 1.52
ATG4D-209ENST00000588857 MAPTP10636 758 aaKnown RBP24.56■■□□□ 1.52
ATG4D-209ENST00000588857 LRRC63Q05C16 580 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 CACNB2Q08289 660 aaPredicted RBP24.56■■□□□ 1.52
ATG4D-209ENST00000588857 TBC1D8BQ0IIM8 1120 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 SARM1Q6SZW1 724 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 ZNF720Q7Z2F6 126 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 NELFCDQ8IXH7 590 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 SLC17A8Q8NDX2 589 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 CEP89Q96ST8 783 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 TRIM5Q9C035 493 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 RNPEPQ9H4A4 650 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 TUT1Q9H6E5 874 aaKnown RBP24.56■■□□□ 1.52
ATG4D-209ENST00000588857 XPNPEP1Q9NQW7 623 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 PCDHB13Q9Y5F0 798 aa24.56■■□□□ 1.52
ATG4D-209ENST00000588857 AP5Z1O43299 807 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 DUSP11O75319 330 aaKnown RBP24.55■■□□□ 1.52
ATG4D-209ENST00000588857 ADCY5O95622 1261 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 SMTNP53814 917 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 PEX3P56589 373 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 DMP1Q13316 513 aaPredicted RBP24.55■■□□□ 1.52
ATG4D-209ENST00000588857 CSGALNACT2Q8N6G5 542 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 ZNF507Q8TCN5 953 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 NOC3LQ8WTT2 800 aaKnown RBP24.55■■□□□ 1.52
ATG4D-209ENST00000588857 FIZ1Q96SL8 496 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 UBE4BO95155 1302 aa24.55■■□□□ 1.52
ATG4D-209ENST00000588857 K7ENM7 598 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 MAFO75444 373 aaPredicted RBP24.54■■□□□ 1.52
ATG4D-209ENST00000588857 PRPF6O94906 941 aaKnown RBP24.54■■□□□ 1.52
ATG4D-209ENST00000588857 HMGCRP04035 888 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 ZNF18P17022 549 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 RTP1P59025 263 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 TRIM32Q13049 653 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 ALCAMQ13740 583 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 BMT2Q1RMZ1 405 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 HSP90AA4PQ58FG1 418 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 ZNF484Q5JVG2 852 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 SLAIN1Q8ND83 568 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 IFT74Q96LB3 600 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 JPH2Q9BR39 696 aaPredicted RBP24.54■■□□□ 1.52
ATG4D-209ENST00000588857 POLR3FQ9H1D9 316 aaPredicted RBP24.54■■□□□ 1.52
ATG4D-209ENST00000588857 KCNG1Q9UIX4 513 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 SEPT4O43236 478 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 ATP1A3P13637 1013 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 PRKAR2AP13861 404 aaKnown RBP24.54■■□□□ 1.52
ATG4D-209ENST00000588857 KNOP1Q1ED39 458 aaKnown RBP24.54■■□□□ 1.52
ATG4D-209ENST00000588857 FOXR2Q6PJQ5 311 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 PXYLP1Q8TE99 480 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 TMEM143Q96AN5 459 aa24.54■■□□□ 1.52
ATG4D-209ENST00000588857 CCDC169A6NNP5 214 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 ZBTB42B2RXF5 422 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 GAS2O43903 313 aaKnown RBP24.53■■□□□ 1.52
ATG4D-209ENST00000588857 SERPINC1P01008 464 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 ZC2HC1CQ53FD0 456 aaPredicted RBP24.53■■□□□ 1.52
ATG4D-209ENST00000588857 CDKAL1Q5VV42 579 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 DUSP9Q99956 384 aaKnown RBP24.53■■□□□ 1.52
ATG4D-209ENST00000588857 TMEM106CQ9BVX2 250 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 SRRTQ9BXP5 876 aaKnown RBP24.53■■□□□ 1.52
ATG4D-209ENST00000588857 THAP9Q9H5L6 903 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 EVPLQ92817 2033 aa24.53■■□□□ 1.52
ATG4D-209ENST00000588857 FGFR1OPO95684 399 aaKnown RBP24.52■■□□□ 1.52
ATG4D-209ENST00000588857 RARBP10826 455 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 INSRRP14616 1297 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 FANCCQ00597 558 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 MLLT1Q03111 559 aaPredicted RBP24.52■■□□□ 1.52
ATG4D-209ENST00000588857 FSCN1Q16658 493 aaKnown RBP24.52■■□□□ 1.52
ATG4D-209ENST00000588857 PPP4R3CPQ6ZMV5 832 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 SPIRE2Q8WWL2 714 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 KCTD10Q9H3F6 313 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 SPC25Q9HBM1 224 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 KMT5AQ9NQR1 393 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 COL1A2P08123 1366 aa24.52■■□□□ 1.52
ATG4D-209ENST00000588857 SLC16A4O15374 487 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 NPTX2P47972 431 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 NCKAP1LP55160 1127 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 SPAG1Q07617 926 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 CCDC173Q0VFZ6 552 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 HAUS6Q7Z4H7 955 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 ANKRD20A12PQ8NF67 263 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 TCP11Q8WWU5 503 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 ST6GALNAC4Q9H4F1 302 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 SUGCTQ9HAC7 445 aa24.51■■□□□ 1.51
ATG4D-209ENST00000588857 CALUO43852 315 aaPredicted RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 MYCP01106 439 aaPredicted RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 MYL3P08590 195 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 C6orf222P0C671 652 aaPredicted RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 HOXD13P35453 343 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 ARL2P36404 184 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 ZNF75DP51815 510 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 GJA9P57773 515 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 IGBP1P78318 339 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 BEX3Q00994 111 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 PPP2R5AQ15172 486 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 ZCWPW2Q504Y3 356 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 FAM114A1Q8IWE2 563 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 RETREG2Q8NC44 543 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 TRAPPC12Q8WVT3 735 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 BSNDQ8WZ55 320 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 NTPCRQ9BSD7 190 aaKnown RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 STRA6Q9BX79 667 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms