RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 COL5A2P05997 1499 aaPredicted RBP16.69■□□□□ 0.26
PTPRS-206ENST00000588552 ZMYND10O75800 440 aa16.69■□□□□ 0.26
PTPRS-206ENST00000588552 ZNF18P17022 549 aa16.69■□□□□ 0.26
PTPRS-206ENST00000588552 SAT1P21673 171 aa16.69■□□□□ 0.26
PTPRS-206ENST00000588552 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
PTPRS-206ENST00000588552 COL3A1P02461 1466 aaPredicted RBP16.69■□□□□ 0.26
PTPRS-206ENST00000588552 PKNOX2Q96KN3 472 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 HUS1O60921 280 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 TROVE2P10155 538 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 SLIT1O75093 1534 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 TBX3O15119 743 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 PSMA2P25787 234 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 ATP1A2P50993 1020 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 APBA1Q02410 837 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 TAF1CQ15572 869 aaPredicted RBP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 RPUSD2Q8IZ73 545 aaKnown RBP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 PPP4R1Q8TF05 950 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 MCUR1Q96AQ8 359 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 CPSF3Q9UKF6 684 aaKnown RBP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 ELF1P32519 619 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 GARSP41250 739 aaKnown RBP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 CDO1Q16878 200 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 DHX40Q8IX18 779 aaKnown RBP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 TRIM9Q9C026 710 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 INTS2Q9H0H0 1204 aaKnown RBP16.68■□□□□ 0.26
PTPRS-206ENST00000588552 ANAPC5Q9UJX4 755 aa16.68■□□□□ 0.26
PTPRS-206ENST00000588552 POC1B-GALNT4F8VUJ3 575 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 NR3C2P08235 984 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 SMARCA1P28370 1054 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 RWDD2BP57060 319 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 GABPB1Q06547 395 aaPredicted RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 KRT39Q6A163 491 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 SCYL1Q96KG9 808 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 EPHB4P54760 987 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 GNGT1P63211 74 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 ARHGEF18Q6ZSZ5 1173 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 GGPS1O95749 300 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 FDPSP14324 419 aaKnown RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 FGFR2P21802 821 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 CNOT8Q9UFF9 292 aaKnown RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 SRGNP10124 158 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 ATP11AP98196 1134 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 ARL13BQ3SXY8 428 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 ZWILCHQ9H900 591 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 INHBAP08476 426 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 TBXAS1P24557 533 aaPredicted RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 NMT1P30419 496 aaKnown RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 BASP1P80723 227 aaKnown RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 PASD1Q8IV76 773 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 PPFIBP2Q8ND30 876 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 OR6J1Q8NGC5 347 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 ZMYND12Q9H0C1 365 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 MED4Q9NPJ6 270 aa16.67■□□□□ 0.26
PTPRS-206ENST00000588552 AGO2Q9UKV8 859 aaKnown RBP16.67■□□□□ 0.26
PTPRS-206ENST00000588552 TPD52P55327 224 aaPredicted RBP16.66■□□□□ 0.26
PTPRS-206ENST00000588552 RBAKQ9NYW8 714 aaPredicted RBP16.66■□□□□ 0.26
PTPRS-206ENST00000588552 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 INPP5BP32019 993 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 ZNF157P51786 506 aaPredicted RBP16.66■□□□□ 0.26
PTPRS-206ENST00000588552 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
PTPRS-206ENST00000588552 EFNA5P52803 228 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 XKR3Q5GH77 459 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 RNF149Q8NC42 400 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
PTPRS-206ENST00000588552 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
PTPRS-206ENST00000588552 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 ANAPC7Q9UJX3 599 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 TEX33O43247 280 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 DNAAF3Q8N9W5 541 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
PTPRS-206ENST00000588552 BCL9O00512 1426 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 KDM4FA0A1W2PPD8 638 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 TRIM49P0CI25 452 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 TRIM49CP0CI26 452 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 GFPT1Q06210 699 aaPredicted RBP16.65■□□□□ 0.26
PTPRS-206ENST00000588552 HSPH1Q92598 858 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 PDXKO00764 312 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 CPP00450 1065 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 GPC5P78333 572 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 PDE1BQ01064 536 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 DRAP1Q14919 205 aaPredicted RBP16.65■□□□□ 0.26
PTPRS-206ENST00000588552 C10orf67Q8IYJ2 551 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 DGAT1O75907 488 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
PTPRS-206ENST00000588552 TXNRD3Q86VQ6 643 aa16.65■□□□□ 0.26
PTPRS-206ENST00000588552 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
PTPRS-206ENST00000588552 ARHGEF2Q92974 986 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms