RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 MRVI1Q9Y6F6 885 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ELP1O95163 1332 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ZNF236Q9UL36 1845 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 MGAMO43451 1857 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 PLXNA1Q9UIW2 1896 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 IGLV3-22A0A075B6J6 115 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 LOC102724159A0A0B4J2E5 919 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 MEIS1O00470 390 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 TBX3O15119 743 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 MSH4O15457 936 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 GAS7O60861 476 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 CUTAO60888 179 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 COBLO75128 1261 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 ARP10275 920 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 PCSK2P16519 638 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 ITGB5P18084 799 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 HOXD10P28358 340 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 PRPHP41219 470 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 TECP42680 631 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 MRPS9P82933 396 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 TBC1D8BQ0IIM8 1120 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 PWP2Q15269 919 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 NFKBIBQ15653 356 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 ARL6IP4Q66PJ3 421 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 SEPT14Q6ZU15 432 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 ARMCX2Q7L311 632 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 EEPD1Q7L9B9 569 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 NIPA1Q7RTP0 329 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 FBXO16Q8IX29 292 aaPredicted RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 TMEM87AQ8NBN3 555 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 RASSF8Q8NHQ8 419 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 CYP2W1Q8TAV3 490 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 CD99L2Q8TCZ2 262 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 GPRASP2Q96D09 838 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 MAML3Q96JK9 1138 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 FGD4Q96M96 766 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 MBOAT7Q96N66 472 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 SLC30A3Q99726 388 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 APBA2Q99767 749 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 SDF4Q9BRK5 362 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 WDR11Q9BZH6 1224 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 TTC12Q9H892 705 aaPredicted RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 C11orf16Q9NQ32 467 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 KCNH7Q9NS40 1196 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 DMGDHQ9UI17 866 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 FBXO2Q9UK22 296 aaPredicted RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 PCDHA7Q9UN72 937 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 PCDHA12Q9UN75 941 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 FNDC3AQ9Y2H6 1198 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 DIS3Q9Y2L1 958 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 SRPRBQ9Y5M8 271 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 UBIAD1Q9Y5Z9 338 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 DDX49Q9Y6V7 483 aaKnown RBP5.97□□□□□ -1.45
LIG3-210ENST00000588109 LCTP09848 1927 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 TCHHQ07283 1943 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 ASTN1O14525 1302 aa5.97□□□□□ -1.45
LIG3-210ENST00000588109 ZNFX1Q9P2E3 1918 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 DDX39AO00148 427 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 IPO5O00410 1097 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 MAFGO15525 162 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 CHMP2AO43633 222 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 EDIL3O43854 480 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 SIN3BO75182 1162 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 GADD45BO75293 160 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 EPXP11678 715 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 EDNRBP24530 442 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 CTGFP29279 349 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 LONP1P36776 959 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 UBA7P41226 1012 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 FLT3LGP49771 235 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 UBE2HP62256 183 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 PRKCZQ05513 592 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 GRIN2CQ14957 1233 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ZRSR1Q15695 479 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 LRCH2Q5VUJ6 765 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ADALQ6DHV7 355 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 NCAPH2Q6IBW4 605 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ALKBH2Q6NS38 261 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 KCNV1Q6PIU1 500 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 CCDC73Q6ZRK6 1079 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 RAB44Q7Z6P3 723 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 MSL3Q8N5Y2 521 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 BEND7Q8N7W2 519 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 C4orf32Q8N8J7 132 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 FSIP1Q8NA03 581 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ERMNQ8TAM6 284 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 NPLOC4Q8TAT6 608 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ETNPPLQ8TBG4 499 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 RAET1EQ8TD07 263 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 HELQQ8TDG4 1101 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ZNF296Q8WUU4 475 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 MRPS27Q92552 414 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 HAS1Q92839 578 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 SLC5A5Q92911 643 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 GJA10Q969M2 543 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 LENG9Q96B70 501 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 SCARF2Q96GP6 870 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms