RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 SFPQP23246 707 aaKnown RBP eCLIP13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 PHKA2P46019 1235 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 GPC3P51654 580 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 EPHB4P54760 987 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 GRIN1Q05586 938 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 LPIN1Q14693 890 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 MBTPS1Q14703 1052 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 KARSQ15046 597 aaKnown RBP13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 FAM102BQ5T8I3 360 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 HERVK_113Q902F9 699 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 TMEM143Q96AN5 459 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 PLIN2Q99541 437 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 INO80BQ9C086 356 aaPredicted RBP13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 CCSER1Q9C0I3 900 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 FAM13BQ9NYF5 915 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 KCND2Q9NZV8 630 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 ZDHHC9Q9Y397 364 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 SLC4A7Q9Y6M7 1214 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 GPR182O15218 404 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 GPR32O75388 356 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 PLCG1P19174 1290 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 STAT6P42226 847 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 GRB10Q13322 594 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 DRP2Q13474 957 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 SHHQ15465 462 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 ECM1Q16610 540 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 C9orf50Q5SZB4 431 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 MAEAQ7L5Y9 396 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 KIFAP3Q92845 792 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 IFT74Q96LB3 600 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 DRC1Q96MC2 740 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 SLC9A7Q96T83 725 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 PRO3102Q9H379 93 aa13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
SDHDP1-201ENST00000588055 A0A087WWV3 80 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 DENND3A2RUS2 1198 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 AMHP03971 560 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 CYP11B2P19099 503 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 CD52P31358 61 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 DDIT3P35638 169 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 LAMTOR4Q0VGL1 99 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 RNF149Q8NC42 400 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 PNMA5Q96PV4 448 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
SDHDP1-201ENST00000588055 A0A087WZ62 844 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 ERLIN2O94905 339 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 NCBP1Q09161 790 aaKnown RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 DMP1Q13316 513 aaPredicted RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 SYT2Q8N9I0 419 aaPredicted RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 RAD54LQ92698 747 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 ZNF668Q96K58 619 aaPredicted RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 FDXACB1Q9BRP7 624 aaPredicted RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 ADAMTS10Q9H324 1103 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 RBM19Q9Y4C8 960 aaKnown RBP13.16□□□□□ -0.3
SDHDP1-201ENST00000588055 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
SDHDP1-201ENST00000588055 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms