RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 ERMNQ8TAM6 284 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 LMBR1Q8WVP7 490 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 TRIM43Q96BQ3 446 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 CTAGE1Q96RT6 745 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 HSD17B14Q9BPX1 270 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 NOC4LQ9BVI4 516 aaKnown RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 HIPK3Q9H422 1215 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 SETD4Q9NVD3 440 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 CEP131Q9UPN4 1083 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 MORC2Q9Y6X9 1032 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 MYH15Q9Y2K3 1946 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 ZBTB42B2RXF5 422 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 H0YGN5 161 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 LYPLA2O95372 231 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 PARNO95453 639 aaKnown RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 F13A1P00488 732 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 ZSCAN22P10073 491 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 MUTP22033 750 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 TECP42680 631 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 UGCGQ16739 394 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 XKR3Q5GH77 459 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 MARCH8Q5T0T0 291 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 HAUS3Q68CZ6 603 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 NCAPH2Q6IBW4 605 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 MFSD5Q6N075 450 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 DTHD1Q6ZMT9 781 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 C4orf19Q8IY42 314 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 BANK1Q8NDB2 785 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 PPP1R13LQ8WUF5 828 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 POM121Q96HA1 1249 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 LBHD1Q9BQE6 289 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 EIF2AK1Q9BQI3 630 aaKnown RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 LXNQ9BS40 222 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 POLR3CQ9BUI4 534 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 NIFKQ9BYG3 293 aaKnown RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 NRBP2Q9NSY0 501 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 TUBE1Q9UJT0 475 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 ZMYND8Q9ULU4 1186 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-204ENST00000586253 PPME1Q9Y570 386 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 TANC1Q9C0D5 1861 aa8.98□□□□□ -0.97
SMAD4-204ENST00000586253 MAGEB2O15479 319 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 SIAH2O43255 324 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 TREHO43280 583 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 SLITRK3O94933 977 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 STBD1O95210 358 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 BRD1O95696 1058 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 CYP2C9P11712 490 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 SYN1P17600 705 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 ITGB8P26012 769 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 RPA1P27694 616 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 BMP8BP34820 402 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 RFC2P35250 354 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
SMAD4-204ENST00000586253 WNT7BP56706 349 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 ZNF200P98182 395 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-204ENST00000586253 SF3A1Q15459 793 aaKnown RBP8.97□□□□□ -0.97
SMAD4-204ENST00000586253 TRIM71Q2Q1W2 868 aaKnown RBP8.97□□□□□ -0.97
SMAD4-204ENST00000586253 ATL3Q6DD88 541 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-204ENST00000586253 TMEM199Q8N511 208 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 DYDC2Q96IM9 177 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 AK8Q96MA6 479 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 ZNF396Q96N95 335 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-204ENST00000586253 TUFT1Q9NNX1 390 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 RGL1Q9NZL6 768 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 PCDHA2Q9Y5H9 948 aa8.97□□□□□ -0.97
SMAD4-204ENST00000586253 SMIM35A0A1B0GVV1 85 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 SLC26A4O43511 780 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 IQCF3P0C7M6 154 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 SPATA31C1P0DKV0 1188 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 CKBP12277 381 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 XRCC6P12956 609 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 SELPP16109 830 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 YWHABP31946 246 aaKnown RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 RFC5P40937 340 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 MAGEA10P43363 369 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 NASPP49321 788 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 IGBP1P78318 339 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 CYP4A11Q02928 519 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 FPGSQ05932 587 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 PPIGQ13427 754 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 PKP1Q13835 747 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 PTPAQ15257 358 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 TARBP2Q15633 366 aaKnown RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 IL17AQ16552 155 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 MTHFD1LQ6UB35 978 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 ANO5Q75V66 913 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 OTUD6AQ7L8S5 288 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 RSPH3Q86UC2 560 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 CATSPER3Q86XQ3 398 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 TPH2Q8IWU9 490 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 EXOC8Q8IYI6 725 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 NME8Q8N427 588 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 KCTD17Q8N5Z5 321 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 RETREG2Q8NC44 543 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 DHX38Q92620 1227 aaKnown RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 BADQ92934 168 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 GDF15Q99988 308 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms