RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
NUP85-224ENST00000583948 DLGAP2Q9P1A6 1054 aa13.06□□□□□ -0.32
NUP85-224ENST00000583948 LZTS1Q9Y250 596 aa13.06□□□□□ -0.32
NUP85-224ENST00000583948 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
NUP85-224ENST00000583948 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.05□□□□□ -0.32
NUP85-224ENST00000583948 E7EWF7 191 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 M0QZ92 97 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 RPS6KB1P23443 525 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 AK2P54819 239 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 CLLU1OSQ5K130 101 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 MTHFD1LQ6UB35 978 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 SLC24A5Q71RS6 500 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 TRMT1LQ7Z2T5 733 aaKnown RBP13.05□□□□□ -0.32
NUP85-224ENST00000583948 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 GPR152Q8TDT2 470 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 OSMRQ99650 979 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 PARD6AQ9NPB6 346 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 PCDHA2Q9Y5H9 948 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 SPEGQ15772 3267 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 ZMYM6O95789 1325 aa13.05□□□□□ -0.32
NUP85-224ENST00000583948 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
NUP85-224ENST00000583948 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP85-224ENST00000583948 FGFR4P22455 802 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 KCNA4P22459 653 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 RFX1P22670 979 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 KLRC1P26715 233 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 DSC3Q14574 896 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
NUP85-224ENST00000583948 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 KIAA0319LQ8IZA0 1049 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 HELQQ8TDG4 1101 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 TCEANC2Q96MN5 208 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 NCDNQ9UBB6 729 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 MTF2Q9Y483 593 aaPredicted RBP13.04□□□□□ -0.32
NUP85-224ENST00000583948 ASPMQ8IZT6 3477 aa13.04□□□□□ -0.32
NUP85-224ENST00000583948 MEIS2O14770 477 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 VTNP04004 478 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
NUP85-224ENST00000583948 FAM189BP81408 668 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 FGD1P98174 961 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 KRT17Q04695 432 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 LPAL2Q16609 132 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 UBE2SQ16763 222 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 VARS2Q5ST30 1063 aaKnown RBP13.03□□□□□ -0.32
NUP85-224ENST00000583948 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 TSSK4Q6SA08 328 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 SLC44A3Q8N4M1 653 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 TMX3Q96JJ7 454 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 MYADMQ96S97 322 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 SENP7Q9BQF6 1050 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
NUP85-224ENST00000583948 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 TMEM161AQ9NX61 479 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 MAP3K20Q9NYL2 800 aaKnown RBP13.03□□□□□ -0.32
NUP85-224ENST00000583948 SQORQ9Y6N5 450 aa13.03□□□□□ -0.32
NUP85-224ENST00000583948 DOCK6Q96HP0 2047 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 RRN3P2A6NIE6 340 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 B4GALT3O60512 393 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
NUP85-224ENST00000583948 TGM1P22735 817 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 BCAR1P56945 870 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 TRDNQ13061 729 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 WTAPQ15007 396 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 SEC23AQ15436 765 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 IFIT1BQ5T764 474 aaKnown RBP13.02□□□□□ -0.33
NUP85-224ENST00000583948 GPR149Q86SP6 731 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 CABP7Q86V35 215 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 ACSF2Q96CM8 615 aaPredicted RBP13.02□□□□□ -0.33
NUP85-224ENST00000583948 RPP25Q9BUL9 199 aaKnown RBP13.02□□□□□ -0.33
NUP85-224ENST00000583948 TMEM117Q9H0C3 514 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 RIOX1Q9H6W3 641 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 USTQ9Y2C2 406 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 SIT1Q9Y3P8 196 aa13.02□□□□□ -0.33
NUP85-224ENST00000583948 DOCK8Q8NF50 2099 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 SMIM35A0A1B0GVV1 85 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
NUP85-224ENST00000583948 ADRB1P08588 477 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 GBP2P32456 591 aaPredicted RBP13.01□□□□□ -0.33
NUP85-224ENST00000583948 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 ANKRD1Q15327 319 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 KIAA0319Q5VV43 1072 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 Q6ZUG5 572 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 CCDC149Q6ZUS6 474 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 DHX32Q7L7V1 743 aaKnown RBP13.01□□□□□ -0.33
NUP85-224ENST00000583948 NLRX1Q86UT6 975 aa13.01□□□□□ -0.33
NUP85-224ENST00000583948 NCOA7Q8NI08 942 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms