RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
MKS1-212ENST00000583577 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 MYH7BA7E2Y1 1941 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 NFIBO00712 420 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 GRM6O15303 877 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 EYA4O95677 639 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 CKBP12277 381 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 PFKFB1P16118 471 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 IFNAR1P17181 557 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 CTNNB1P35222 781 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 ADAM15Q13444 863 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 GNL2Q13823 731 aaKnown RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 PTPN21Q16825 1174 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 NT5DC1Q5TFE4 455 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 GDF6Q6KF10 455 aaPredicted RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 MCF2L2Q86YR7 1114 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 KRT222Q8N1A0 295 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 DHX38Q92620 1227 aaKnown RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 COL26A1Q96A83 441 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 MSLNLQ96KJ4 702 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 MAF1Q9H063 256 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 NCOA5Q9HCD5 579 aaKnown RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 CYP39A1Q9NYL5 469 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 CLIC4Q9Y696 253 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 CNTNAP5Q8WYK1 1306 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.65
MKS1-212ENST00000583577 CEP295Q9C0D2 2601 aa11.02□□□□□ -0.65
MKS1-212ENST00000583577 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 A0A1B0GVL5 298 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 ARHGAP6O43182 974 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 PPP1R11O60927 126 aaPredicted RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 XBP1P17861 261 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 ICAM3P32942 547 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 ETF1P62495 437 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 FANCCQ00597 558 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 AKAP17AQ02040 695 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 SSRP1Q08945 709 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 BMS1Q14692 1282 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 NCAPHQ15003 741 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 PTPAQ15257 358 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 RNF207Q6ZRF8 634 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 KRI1Q8N9T8 703 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 CLEC4DQ8WXI8 215 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 CTAGE1Q96RT6 745 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 PHF7Q9BWX1 381 aaPredicted RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 XPO4Q9C0E2 1151 aaKnown RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 TMX1Q9H3N1 280 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 FAM53CQ9NYF3 392 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 PRDM4Q9UKN5 801 aa11.01□□□□□ -0.65
MKS1-212ENST00000583577 USP15Q9Y4E8 981 aaPredicted RBP11.01□□□□□ -0.65
MKS1-212ENST00000583577 hCG_1642624A0A1W2PR95 340 aa11□□□□□ -0.65
MKS1-212ENST00000583577 hCG_1984214I3L0E3 225 aa11□□□□□ -0.65
MKS1-212ENST00000583577 STX10O60499 249 aa11□□□□□ -0.65
MKS1-212ENST00000583577 KPNA6O60684 536 aa11□□□□□ -0.65
MKS1-212ENST00000583577 LGR5O75473 907 aa11□□□□□ -0.65
MKS1-212ENST00000583577 SMC2O95347 1197 aa11□□□□□ -0.65
MKS1-212ENST00000583577 CFBP00751 764 aa11□□□□□ -0.65
MKS1-212ENST00000583577 CALML3P27482 149 aa11□□□□□ -0.65
MKS1-212ENST00000583577 ERCC5P28715 1186 aaPredicted RBP11□□□□□ -0.65
MKS1-212ENST00000583577 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
MKS1-212ENST00000583577 DPCR1Q3MIW9 517 aa11□□□□□ -0.65
MKS1-212ENST00000583577 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
MKS1-212ENST00000583577 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
MKS1-212ENST00000583577 SMRP1Q8NCR6 262 aa11□□□□□ -0.65
MKS1-212ENST00000583577 ENOX1Q8TC92 643 aaKnown RBP11□□□□□ -0.65
MKS1-212ENST00000583577 COPS5Q92905 334 aa11□□□□□ -0.65
MKS1-212ENST00000583577 MPHOSPH6Q99547 160 aaKnown RBP11□□□□□ -0.65
MKS1-212ENST00000583577 HINFPQ9BQA5 517 aa11□□□□□ -0.65
MKS1-212ENST00000583577 NAA15Q9BXJ9 866 aaKnown RBP11□□□□□ -0.65
MKS1-212ENST00000583577 LMAN2LQ9H0V9 348 aa11□□□□□ -0.65
MKS1-212ENST00000583577 MAP3K20Q9NYL2 800 aaKnown RBP11□□□□□ -0.65
MKS1-212ENST00000583577 IFNKQ9P0W0 207 aa11□□□□□ -0.65
MKS1-212ENST00000583577 CLEC1BQ9P126 229 aa11□□□□□ -0.65
MKS1-212ENST00000583577 ADD3Q9UEY8 706 aaKnown RBP11□□□□□ -0.65
MKS1-212ENST00000583577 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
MKS1-212ENST00000583577 B4DLN1 442 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
MKS1-212ENST00000583577 DEXIO95424 95 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 TUBBP07437 444 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 MRPL12P52815 198 aaKnown RBP10.99□□□□□ -0.65
MKS1-212ENST00000583577 UBASH3AP57075 661 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 RPS6P62753 249 aaKnown RBP10.99□□□□□ -0.65
MKS1-212ENST00000583577 FUT2Q10981 343 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 MBTPS1Q14703 1052 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 ZNF618Q5T7W0 954 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 JAKMIP3Q5VZ66 844 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 E4F1Q66K89 784 aaPredicted RBP10.99□□□□□ -0.65
MKS1-212ENST00000583577 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 KRBA2Q6ZNG9 492 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 TMC6Q7Z403 805 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 HEATR3Q7Z4Q2 680 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 VSTM4Q8IW00 320 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 FAM177A1Q8N128 213 aaPredicted RBP10.99□□□□□ -0.65
MKS1-212ENST00000583577 DBF4BQ8NFT6 615 aa10.99□□□□□ -0.65
MKS1-212ENST00000583577 CUL5Q93034 780 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms