RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 DSC3Q14574 896 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 ALYREFQ86V81 257 aaKnown RBP16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 KCNB2Q92953 911 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 CCDC136Q96JN2 1154 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 FBXL18Q96ME1 805 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 TEKT3Q9BXF9 490 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 SPG21Q9NZD8 308 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 TRIOO75962 3097 aa16.43■□□□□ 0.22
CDC42EP4-208ENST00000582303 FSCN2O14926 492 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 SKIP12755 728 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 IFNAR1P17181 557 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 RPS6KB1P23443 525 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 HSPA4P34932 840 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 NLRP5P59047 1200 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 ERVFC1P60507 584 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 PRKCEQ02156 737 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 NHLH1Q02575 133 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 LRCH2Q5VUJ6 765 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 KCNT2Q6UVM3 1135 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 TMC7Q7Z402 723 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 PHKBQ93100 1093 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 PBXIP1Q96AQ6 731 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 RPGRIP1Q96KN7 1286 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 SLC26A6Q9BXS9 759 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 INO80BQ9C086 356 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 ADAMTS10Q9H324 1103 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 CWH43Q9H720 699 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 CHST12Q9NRB3 414 aa16.42■□□□□ 0.22
CDC42EP4-208ENST00000582303 A0A0U1RQF3 1178 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 TMEM221A6NGB7 291 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 M0R296 226 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 DARSP14868 501 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 GPC3P51654 580 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 ZXDAP98168 799 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 PLPP4Q5VZY2 271 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 ECHDC2Q86YB7 292 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 LRRC71Q8N4P6 559 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 LINC01465Q8N7H1 131 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 TMEM87AQ8NBN3 555 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 SUSD6Q92537 303 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 CASP10Q92851 521 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 LENG9Q96B70 501 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 CASD1Q96PB1 797 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 GCOM2Q9BZD3 368 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 NR2E1Q9Y466 385 aa16.41■□□□□ 0.22
CDC42EP4-208ENST00000582303 WDFY4Q6ZS81 3184 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 CPLX1O14810 134 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 MSH4O15457 936 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 CHMP2AO43633 222 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 SFPQP23246 707 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 TECP42680 631 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 MRE11P49959 708 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 PTPN5P54829 565 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 SIGLEC14Q08ET2 396 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 XKR3Q5GH77 459 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 GALNT17Q6IS24 598 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 CES5AQ6NT32 575 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 ANKRD54Q6NXT1 300 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 NECTIN4Q96NY8 510 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 STK39Q9UEW8 545 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
CDC42EP4-208ENST00000582303 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 ZNF862O60290 1169 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 DKC1O60832 514 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 CPA1P15085 419 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 EVCP57679 992 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 ITIH3Q06033 890 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 SSRP1Q08945 709 aaKnown RBP16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 GIT2Q14161 759 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 NTRK3Q16288 839 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 Q4G0T1 1027 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 MIER3Q7Z3K6 550 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 ZBTB33Q86T24 672 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 TMEM169Q96HH4 297 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 TRAIPQ9BWF2 469 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 VPS54Q9P1Q0 977 aa16.39■□□□□ 0.21
CDC42EP4-208ENST00000582303 PDIA3P30101 505 aaKnown RBP16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 MOXD1Q6UVY6 613 aa16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 LRRC55Q6ZSA7 311 aa16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 FBXL6Q8N531 539 aa16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 MRPL43Q8N983 215 aaKnown RBP16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 NIFKQ9BYG3 293 aaKnown RBP16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 SEPT9Q9UHD8 586 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP4-208ENST00000582303 PCDHA4Q9UN74 947 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms