RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 APBB2Q92870 758 aa23.06■■□□□ 1.28
PPP4R1-221ENST00000582240 SLC9A7Q96T83 725 aa23.06■■□□□ 1.28
PPP4R1-221ENST00000582240 FDXACB1Q9BRP7 624 aaPredicted RBP23.06■■□□□ 1.28
PPP4R1-221ENST00000582240 ZSCAN16Q9H4T2 348 aaPredicted RBP23.06■■□□□ 1.28
PPP4R1-221ENST00000582240 ERVK-5Q9HDB9 667 aa23.06■■□□□ 1.28
PPP4R1-221ENST00000582240 E9PMD0 336 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 ZSCAN22P10073 491 aaPredicted RBP23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 XRCC6P12956 609 aaKnown RBP eCLIP23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 ARL6IP4Q66PJ3 421 aaKnown RBP23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 KCNK18Q7Z418 384 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 PHOSPHO2Q8TCD6 241 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 NLRP4Q96MN2 994 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 PNMA5Q96PV4 448 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 MTRQ99707 1265 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 JPH2Q9BR39 696 aaPredicted RBP23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 DAXXQ9UER7 740 aaPredicted RBP23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 MSRAQ9UJ68 235 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 SQORQ9Y6N5 450 aa23.05■■□□□ 1.28
PPP4R1-221ENST00000582240 MGEA5O60502 916 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 AMHP03971 560 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 SRGAP2CP0DJJ0 459 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 SPECC1Q5M775 1068 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 USP38Q8NB14 1042 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 TIFAQ96CG3 184 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 ZBED2Q9BTP6 218 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 TTYH1Q9H313 450 aaPredicted RBP23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 GPRC5CQ9NQ84 441 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 DBR1Q9UK59 544 aaKnown RBP23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 PPME1Q9Y570 386 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 COL4A3BPQ9Y5P4 624 aa23.04■■□□□ 1.28
PPP4R1-221ENST00000582240 ARHGEF35A5YM69 484 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 EFCAB14O75071 495 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 ARHGEF15O94989 841 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 F13A1P00488 732 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 DARSP14868 501 aaKnown RBP23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 LAMTOR4Q0VGL1 99 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 PADI6Q6TGC4 694 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 DEFB123Q8N688 67 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 ASAP3Q8TDY4 903 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 CLIC6Q96NY7 704 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 ATP6V0A4Q9HBG4 840 aa23.03■■□□□ 1.28
PPP4R1-221ENST00000582240 LCHNA4D1U4 455 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 DGAT1O75907 488 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 BMP15O95972 392 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 EIF4BP23588 611 aaKnown RBP23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 GRB10Q13322 594 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 BECN1Q14457 450 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 RAB30Q15771 203 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 CABP7Q86V35 215 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 PSPC1Q8WXF1 523 aaKnown RBP23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 GCOM2Q9BZD3 368 aaPredicted RBP23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 POLR3FQ9H1D9 316 aaPredicted RBP23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 BHMT2Q9H2M3 363 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 SEMA6BQ9H3T3 888 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 PCDHA11Q9Y5I1 949 aa23.02■■□□□ 1.28
PPP4R1-221ENST00000582240 GPR182O15218 404 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 TLL1O43897 1013 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 ZNF697Q5TEC3 545 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 USP49Q70CQ1 688 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 SPRED2Q7Z698 418 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 EXOC8Q8IYI6 725 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 TCP11Q8WWU5 503 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 CHAMP1Q96JM3 812 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 ADAM2Q99965 735 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 CSRNP2Q9H175 543 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 FBXO2Q9UK22 296 aaPredicted RBP23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 ZDHHC9Q9Y397 364 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 STK24Q9Y6E0 443 aa23.01■■□□□ 1.27
PPP4R1-221ENST00000582240 PTPRSQ13332 1948 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 LOXHD1Q8IVV2 1947 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 GJB5O95377 273 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 CA3P07451 260 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 MUTP22033 750 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 ARL2P36404 184 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 FAM102BQ5T8I3 360 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 RNF149Q8NC42 400 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 TOP1MTQ969P6 601 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 MINDY3Q9H8M7 445 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 CERS4Q9HA82 394 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 IFT122Q9HBG6 1241 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 DNM3Q9UQ16 869 aa23■■□□□ 1.27
PPP4R1-221ENST00000582240 EYA4O95677 639 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 GLRA2P23416 452 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 DSC3Q14574 896 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 SLC39A14Q15043 492 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 STK38Q15208 465 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 ZNF410Q86VK4 478 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 LRRC15Q8TF66 581 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 EPSTI1Q96J88 318 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 ZNF396Q96N95 335 aaPredicted RBP22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 ZNF576Q9H609 170 aa22.99■■□□□ 1.27
PPP4R1-221ENST00000582240 DENND3A2RUS2 1198 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 GAS2O43903 313 aaKnown RBP22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 SSBP05455 408 aaKnown RBP eCLIP22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 CYP11B2P19099 503 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 LONP1P36776 959 aaKnown RBP22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 UBA7P41226 1012 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 CDC42EP1Q00587 391 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 KARSQ15046 597 aaKnown RBP22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 GPR153Q6NV75 609 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms