RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 FBXO2Q9UK22 296 aaPredicted RBP15.02■□□□□ -0
CSNK1D-220ENST00000581737 MTCH2Q9Y6C9 303 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 SLC4A7Q9Y6M7 1214 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 GBF1Q92538 1859 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 MAGEB2O15479 319 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 SLITRK3O94933 977 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 ATP4AP20648 1035 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 UBA7P41226 1012 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 IGBP1P78318 339 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 PTK7Q13308 1070 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 CTTNQ14247 550 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 TAF2Q6P1X5 1199 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 EXOC8Q8IYI6 725 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 CDK5RAP3Q96JB5 506 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 JPH2Q9BR39 696 aaPredicted RBP15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 NIFKQ9BYG3 293 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 NT5C3AQ9H0P0 336 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 ANKEF1Q9NU02 776 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 PCDHA11Q9Y5I1 949 aa15.01□□□□□ -0.01
CSNK1D-220ENST00000581737 MBLAC1A4D2B0 266 aaPredicted RBP15□□□□□ -0.01
CSNK1D-220ENST00000581737 ZBBXA8MT70 800 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 MED24O75448 989 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 CA3P07451 260 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 CYP2C9P11712 490 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 XRCC6P12956 609 aaKnown RBP eCLIP15□□□□□ -0.01
CSNK1D-220ENST00000581737 YWHABP31946 246 aaKnown RBP15□□□□□ -0.01
CSNK1D-220ENST00000581737 CCDC173Q0VFZ6 552 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 BFSP2Q13515 415 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 SKIV2LQ15477 1246 aaKnown RBP15□□□□□ -0.01
CSNK1D-220ENST00000581737 KANK3Q6NY19 840 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 RBM43Q6ZSC3 357 aaKnown RBP15□□□□□ -0.01
CSNK1D-220ENST00000581737 RSPH3Q86UC2 560 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 CABP7Q86V35 215 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 SERINC5Q86VE9 423 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 CATSPER3Q86XQ3 398 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 RETREG2Q8NC44 543 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 RASSF8Q8NHQ8 419 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 CAGE1Q8TC20 777 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 CALML4Q96GE6 196 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 C11orf16Q9NQ32 467 aa15□□□□□ -0.01
CSNK1D-220ENST00000581737 TCF20Q9UGU0 1960 aaKnown RBP15□□□□□ -0.01
CSNK1D-220ENST00000581737 PP2D1A8MPX8 630 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 TREHO43280 583 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 CAND2O75155 1236 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 NR1I2O75469 434 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 SPATA31C1P0DKV0 1188 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 ATP2A2P16615 1042 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 RFC5P40937 340 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 SYKP43405 635 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 ADAM17P78536 824 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 TBC1D8BQ0IIM8 1120 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 MTERF2Q49AM1 385 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 ANO5Q75V66 913 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 TRMT1LQ7Z2T5 733 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 DEFB128Q7Z7B8 93 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 C1QTNF1Q9BXJ1 281 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 CSRNP2Q9H175 543 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 MTIF3Q9H2K0 278 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 CYP26B1Q9NR63 512 aa14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 WRAP73Q9P2S5 460 aaPredicted RBP14.99□□□□□ -0.01
CSNK1D-220ENST00000581737 TANC1Q9C0D5 1861 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 FAM237AA0A1B0GTK4 181 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 SMIM35A0A1B0GVV1 85 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 TLL1O43897 1013 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 STBD1O95210 358 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 POU3F3P20264 500 aaPredicted RBP14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 KLRC1P26715 233 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 TMOD1P28289 359 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 RBL2Q08999 1139 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 TARBP2Q15633 366 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 STX1AQ16623 288 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 XKR9Q5GH70 373 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 HYIQ5T013 277 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 RESP18Q5W5W9 173 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 MTHFD1LQ6UB35 978 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 GAS2L3Q86XJ1 694 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 TRAPPC12Q8WVT3 735 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 SLC7A3Q8WY07 619 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 MMTAG2Q9BU76 263 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 CCSER1Q9C0I3 900 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 CCDC39Q9UFE4 941 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 USP25Q9UHP3 1055 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 DBR1Q9UK59 544 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 KIAA1024Q9UPX6 916 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 DNM3Q9UQ16 869 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 PCDHA2Q9Y5H9 948 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 EVPLQ92817 2033 aa14.98□□□□□ -0.01
CSNK1D-220ENST00000581737 ARHGEF35A5YM69 484 aa14.97□□□□□ -0.01
CSNK1D-220ENST00000581737 ZBTB42B2RXF5 422 aa14.97□□□□□ -0.01
CSNK1D-220ENST00000581737 C22orf31O95567 290 aa14.97□□□□□ -0.01
CSNK1D-220ENST00000581737 PFKFB1P16118 471 aa14.97□□□□□ -0.01
CSNK1D-220ENST00000581737 CDC25AP30304 524 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms