RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 HOXA2O43364 376 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 KLRC1P26715 233 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 MTMR1Q13613 665 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 FAM43BQ6ZT52 329 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-210ENST00000580713 LOXHD1Q8IVV2 1947 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 RNF169Q8NCN4 708 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 IL25Q9H293 177 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 JPH1Q9HDC5 661 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-210ENST00000580713 ANO2Q9NQ90 1003 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 DMXL1Q9Y485 3027 aa12.24□□□□□ -0.45
TOP3A-210ENST00000580713 ITGB5P18084 799 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 STAT5BP51692 787 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 ZC3H14Q6PJT7 736 aaKnown RBP12.23□□□□□ -0.45
TOP3A-210ENST00000580713 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 LRRC55Q6ZSA7 311 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 CYB5R4Q7L1T6 521 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 OTOP3Q7RTS5 596 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 CABP7Q86V35 215 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 LRRC43Q8N309 656 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 DCLK2Q8N568 766 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 TMEM40Q8WWA1 233 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 RUBCNQ92622 972 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 CASD1Q96PB1 797 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 ELAC1Q9H777 363 aaKnown RBP12.23□□□□□ -0.45
TOP3A-210ENST00000580713 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 DUSP12Q9UNI6 340 aa12.23□□□□□ -0.45
TOP3A-210ENST00000580713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-210ENST00000580713 ERICH2A1L162 156 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 NT5C1B-RDH14C9J2C7 533 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 MEIS2O14770 477 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 IFIT3O14879 490 aaKnown RBP12.22□□□□□ -0.45
TOP3A-210ENST00000580713 EPCAMP16422 314 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
TOP3A-210ENST00000580713 FAM189BP81408 668 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 TRDNQ13061 729 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 RSPO4Q2I0M5 234 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-210ENST00000580713 KIZQ2M2Z5 673 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 SPECC1Q5M775 1068 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 PLPPR4Q7Z2D5 763 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 AUTS2Q8WXX7 1259 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 RRP36Q96EU6 259 aaKnown RBP12.22□□□□□ -0.45
TOP3A-210ENST00000580713 OSMRQ99650 979 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 C22orf23Q9BZE7 217 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 JADE2Q9NQC1 790 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 DLL3Q9NYJ7 618 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 UBIAD1Q9Y5Z9 338 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 CEP250Q9BV73 2442 aa12.22□□□□□ -0.45
TOP3A-210ENST00000580713 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 MAFGO15525 162 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.45
TOP3A-210ENST00000580713 CFHP08603 1231 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.45
TOP3A-210ENST00000580713 ACTR2P61160 394 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 FAM228AQ86W67 206 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 KIAA0319LQ8IZA0 1049 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 VPS52Q8N1B4 723 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 SLC39A11Q8N1S5 342 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 TMEM169Q96HH4 297 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 LSG1Q9H089 658 aaKnown RBP12.21□□□□□ -0.45
TOP3A-210ENST00000580713 KCNK12Q9HB15 430 aa12.21□□□□□ -0.45
TOP3A-210ENST00000580713 SEC63Q9UGP8 760 aaKnown RBP12.21□□□□□ -0.45
TOP3A-210ENST00000580713 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 BACH1O14867 736 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 NARSO43776 548 aaKnown RBP12.2□□□□□ -0.46
TOP3A-210ENST00000580713 HBP1O60381 514 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-210ENST00000580713 CRYBB1P53674 252 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-210ENST00000580713 DSC3Q14574 896 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 WTAPQ15007 396 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 UBE2SQ16763 222 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 CATIPQ7Z7H3 387 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 PSTPIP2Q9H939 334 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 SENP2Q9HC62 589 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 RNF19AQ9NV58 838 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 CA14Q9ULX7 337 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
TOP3A-210ENST00000580713 ACACBO00763 2458 aa12.2□□□□□ -0.46
TOP3A-210ENST00000580713 LAMA4Q16363 1823 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 VTNP04004 478 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 DCNP07585 359 aaKnown RBP12.19□□□□□ -0.46
TOP3A-210ENST00000580713 SP9P0CG40 484 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 SLC26A2P50443 739 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 BCAR1P56945 870 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 PTH1RQ03431 593 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 TBC1D8BQ0IIM8 1120 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
TOP3A-210ENST00000580713 NONOQ15233 471 aaKnown RBP eCLIP12.19□□□□□ -0.46
TOP3A-210ENST00000580713 FAM160B1Q5W0V3 765 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 GPR149Q86SP6 731 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 METTL13Q8N6R0 699 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 FEZF2Q8TBJ5 459 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 HELQQ8TDG4 1101 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 SFXN1Q9H9B4 322 aa12.19□□□□□ -0.46
TOP3A-210ENST00000580713 TBC1D17Q9HA65 648 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms