RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 LINC01599Q8WXQ3 324 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 MTMR9Q96QG7 549 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 MTRQ99707 1265 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 ADAM2Q99965 735 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
NDEL1-208ENST00000580237 RAB34Q9BZG1 259 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 C1orf112Q9NSG2 853 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
NDEL1-208ENST00000580237 MYH11P35749 1972 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 MYH15Q9Y2K3 1946 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 ATG2AQ2TAZ0 1938 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 EPOPA6NHQ4 379 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 RFXAPO00287 272 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 GAS2O43903 313 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 DARSP14868 501 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 CTNNB1P35222 781 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 ERVK-21P61565 698 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 ADGRE1Q14246 886 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 CCDC85BQ15834 202 aaPredicted RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 RILPL1Q5EBL4 403 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 LARP1BQ659C4 914 aaKnown RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
NDEL1-208ENST00000580237 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 SAMD11Q96NU1 681 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 ADAMTS10Q9H324 1103 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 TMX1Q9H3N1 280 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 ATP6V0A4Q9HBG4 840 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 PCDHB7Q9Y5E2 793 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 COL4A3BPQ9Y5P4 624 aa12.16□□□□□ -0.46
NDEL1-208ENST00000580237 A0A087WZ62 844 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 IGKV6-21A0A0C4DH24 114 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
NDEL1-208ENST00000580237 SLITRK3O94933 977 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 PDCP20941 246 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 PTGDRQ13258 359 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 GRB10Q13322 594 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 SLC24A5Q71RS6 500 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
NDEL1-208ENST00000580237 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 TMEM143Q96AN5 459 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 FDXACB1Q9BRP7 624 aaPredicted RBP12.15□□□□□ -0.46
NDEL1-208ENST00000580237 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
NDEL1-208ENST00000580237 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
NDEL1-208ENST00000580237 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 RWDD3Q9Y3V2 267 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 PCDHB6Q9Y5E3 794 aa12.15□□□□□ -0.46
NDEL1-208ENST00000580237 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 LAD1O00515 517 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 MGEA5O60502 916 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 DGAT1O75907 488 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 DGKIO75912 1065 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 LYPLA2O95372 231 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 FGFR4P22455 802 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 CCT6AP40227 531 aaKnown RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 TFDP1Q14186 410 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 SPOUT1Q5T280 376 aaKnown RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 CATSPER4Q7RTX7 472 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 ABI1Q8IZP0 508 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 SNX29Q8TEQ0 813 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 HSD17B14Q9BPX1 270 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 RGS18Q9NS28 235 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 ANKEF1Q9NU02 776 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 DACT1Q9NYF0 836 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 LRWD1Q9UFC0 647 aa12.14□□□□□ -0.47
NDEL1-208ENST00000580237 PIN4Q9Y237 131 aaKnown RBP12.14□□□□□ -0.47
NDEL1-208ENST00000580237 PLXNA4Q9HCM2 1894 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 CDH23Q9H251 3354 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 ZBTB39O15060 712 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 HOXA2O43364 376 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 MED24O75448 989 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 CSDE1O75534 798 aaKnown RBP12.13□□□□□ -0.47
NDEL1-208ENST00000580237 ERLIN2O94905 339 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 PHKA2P46019 1235 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 RARRES1P49788 294 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 TOB1P50616 345 aaPredicted RBP12.13□□□□□ -0.47
NDEL1-208ENST00000580237 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
NDEL1-208ENST00000580237 LAMTOR4Q0VGL1 99 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 CUL4AQ13619 759 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 PTPROQ16827 1216 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 EPC2Q52LR7 807 aa12.13□□□□□ -0.47
NDEL1-208ENST00000580237 TWF2Q6IBS0 349 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms