RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TMOD1P28289 359 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 LIFRP42702 1097 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 AP3B2Q13367 1082 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PPP1R18Q6NYC8 613 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 LRRC55Q6ZSA7 311 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ADSSL1Q8N142 457 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 RTP3Q9BQQ7 232 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SEMA4AQ9H3S1 761 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 RIC8AQ9NPQ8 531 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CYP26B1Q9NR63 512 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 IRAK3Q9Y616 596 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ZBTB42B2RXF5 422 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CXCL14O95715 111 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 VTNP04004 478 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ASGR2P07307 311 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 AOC1P19801 751 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 EIF4BP23588 611 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CA8P35219 290 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ZNF76P36508 570 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 NAPAP54920 295 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 RARS2Q5T160 578 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SWSAP1Q6NVH7 229 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 OTOP3Q7RTS5 596 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ECHDC2Q86YB7 292 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CKAP2LQ8IYA6 745 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MAP4K1Q92918 833 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ANO3Q9BYT9 981 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 DACT1Q9NYF0 836 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 STK39Q9UEW8 545 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TCEAL9Q9UHQ7 104 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SLC12A7Q9Y666 1083 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TAF6LQ9Y6J9 622 aa13.86□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CHD8Q9HCK8 2581 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 A0A0U1RQF3 1178 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CCNE2O96020 404 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CHMLP26374 656 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SREBF1P36956 1147 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PBX3P40426 434 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 POLGP54098 1239 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TTC22Q5TAA0 569 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PPFIBP1Q86W92 1011 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CCDC105Q8IYK2 499 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 FLCNQ8NFG4 579 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 FAM167AQ96KS9 214 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TBC1D22BQ9NU19 505 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 AKT3Q9Y243 479 aa13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MAFBQ9Y5Q3 323 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 hCG_1642624A0A1W2PR95 340 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 IPO5O00410 1097 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SGSM2O43147 1006 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 IGHDP01880 384 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ADCY7P51828 1080 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 NLRP11P59045 1033 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TDGQ13569 410 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ZNF746Q6NUN9 644 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CCDC149Q6ZUS6 474 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PLA2G4DQ86XP0 818 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 VPS52Q8N1B4 723 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 RNF169Q8NCN4 708 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PPP1R16BQ96T49 567 aa13.84□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 PSAPP07602 524 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 GSPT1P15170 499 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 RXRAP19793 462 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 ATP4AP20648 1035 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 BCAR1P56945 870 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 CDC42EP1Q00587 391 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 SETQ01105 290 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 ANGPT1Q15389 498 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 CLLU1OSQ5K130 101 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 ZNF598Q86UK7 904 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 CABP7Q86V35 215 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 HELQQ8TDG4 1101 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 ZBP1Q9H171 429 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 ADAMTS10Q9H324 1103 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 SMOC2Q9H3U7 446 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 CHST12Q9NRB3 414 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 RBM28Q9NW13 759 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 IGSF9Q9P2J2 1179 aa13.83□□□□□ -0.2
CDK5RAP3-216ENST00000579853 FBXL21Q9UKT6 434 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms