RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 SRPRBQ9Y5M8 271 aaKnown RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 COL4A3BPQ9Y5P4 624 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 PPP6R2O75170 966 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 EYA4O95677 639 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 AMHP03971 560 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 CYP11B2P19099 503 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 UBA7P41226 1012 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 DEFB103AP81534 67 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 GRIN1Q05586 938 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 POU5F1BQ06416 359 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 RAB30Q15771 203 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 TMEM119Q4V9L6 283 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 FAM109BQ6ICB4 259 aaPredicted RBP11.16□□□□□ -0.62
MKS1-208ENST00000579358 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 CABP7Q86V35 215 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 FAM228AQ86W67 206 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 KRI1Q8N9T8 703 aaKnown RBP11.16□□□□□ -0.62
MKS1-208ENST00000579358 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
MKS1-208ENST00000579358 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 CDK5RAP3Q96JB5 506 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
MKS1-208ENST00000579358 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 CSRNP2Q9H175 543 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 BHMT2Q9H2M3 363 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 BMP2KQ9NSY1 1161 aaPredicted RBP11.16□□□□□ -0.62
MKS1-208ENST00000579358 NOC2LQ9Y3T9 749 aaKnown RBP11.16□□□□□ -0.62
MKS1-208ENST00000579358 PCDHA11Q9Y5I1 949 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 CEP290O15078 2479 aa11.16□□□□□ -0.62
MKS1-208ENST00000579358 A0A087WWV3 80 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 A0A087WZ62 844 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 E9PMD0 336 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 SFPQP23246 707 aaKnown RBP eCLIP11.15□□□□□ -0.62
MKS1-208ENST00000579358 DNAJB2P25686 324 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 MARCKSP29966 332 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 ARL2P36404 184 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 CEBPZQ03701 1054 aaKnown RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 LAMTOR4Q0VGL1 99 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 NFX1Q12986 1120 aaKnown RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 GRB10Q13322 594 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 TFDP1Q14186 410 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 STK38Q15208 465 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
MKS1-208ENST00000579358 SRGAP1Q7Z6B7 1085 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 CALML4Q96GE6 196 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 NLRP4Q96MN2 994 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 PNMA5Q96PV4 448 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 FDXACB1Q9BRP7 624 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 NFKBIZQ9BYH8 718 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 PBX4Q9BYU1 374 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
MKS1-208ENST00000579358 IFT122Q9HBG6 1241 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 ST3GAL5Q9UNP4 418 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 ATP6V1DQ9Y5K8 247 aa11.15□□□□□ -0.62
MKS1-208ENST00000579358 RANBP2P49792 3224 aaKnown RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 ENPP3O14638 875 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 SPTLC2O15270 562 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 GJB5O95377 273 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 TXLNAP40222 546 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 PHKA2P46019 1235 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
MKS1-208ENST00000579358 KCNK18Q7Z418 384 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 RNF149Q8NC42 400 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 LINC01599Q8WXQ3 324 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 TOP1MTQ969P6 601 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 TIFAQ96CG3 184 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 ZNF668Q96K58 619 aaPredicted RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 TIPINQ9BVW5 301 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 POLR3FQ9H1D9 316 aaPredicted RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 TMX1Q9H3N1 280 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 C1orf112Q9NSG2 853 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 KCND2Q9NZV8 630 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 TFIP11Q9UBB9 837 aaKnown RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 MSRAQ9UJ68 235 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 SCN5AQ14524 2016 aa11.14□□□□□ -0.63
MKS1-208ENST00000579358 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
MKS1-208ENST00000579358 TLL1O43897 1013 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 MGEA5O60502 916 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 GLRA2P23416 452 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 GUCY2CP25092 1073 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 DDIT3P35638 169 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 PBX2P40425 430 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 PTENP60484 403 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 CAPSQ13938 189 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 DSC3Q14574 896 aa11.13□□□□□ -0.63
MKS1-208ENST00000579358 KARSQ15046 597 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms