RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 UBE2SQ16763 222 aa12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 CCDC60Q8IWA6 550 aaPredicted RBP12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 MXRA8Q9BRK3 442 aa12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 CNNM2Q9H8M5 875 aa12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
SUPT4H1-203ENST00000579289 CACNA1GO43497 2377 aa12.77□□□□□ -0.36
SUPT4H1-203ENST00000579289 A0A0U1RQF3 1178 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 EFEMP2O95967 443 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 DCNP07585 359 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 CLCN4P51793 760 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 NUCB1Q02818 461 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 KRT17Q04695 432 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 PHLDB3Q6NSJ2 640 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 SLC44A3Q8N4M1 653 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 KCNG4Q8TDN1 519 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 PIBF1Q8WXW3 757 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 NELL1Q92832 810 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 PPP1R16BQ96T49 567 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 IGSF9Q9P2J2 1179 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 PCDHA6Q9UN73 950 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 PCDHA8Q9Y5H6 950 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 COL1A2P08123 1366 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 WDFY3Q8IZQ1 3526 aa12.77□□□□□ -0.37
SUPT4H1-203ENST00000579289 HBP1O60381 514 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 LRRN2O75325 713 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 VTNP04004 478 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 CFHP08603 1231 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 CYP21A2P08686 494 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 SLC26A2P50443 739 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 METAP2P50579 478 aaKnown RBP eCLIP12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 TBC1D8BQ0IIM8 1120 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 OTOP3Q7RTS5 596 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 DDX53Q86TM3 631 aaKnown RBP12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 HELQQ8TDG4 1101 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 IGSF21Q96ID5 467 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 KLHL5Q96PQ7 755 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 MYADMQ96S97 322 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 MAP3K14Q99558 947 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 RHOBTB2Q9BYZ6 727 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 TBC1D17Q9HA65 648 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 EPS15L1Q9UBC2 864 aa12.76□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 MEIS1O00470 390 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 GALTP07902 379 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 POLGP54098 1239 aaPredicted RBP12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 CMASQ8NFW8 434 aaPredicted RBP12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 PATJQ8NI35 1801 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 GPR152Q8TDT2 470 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 RILPL2Q969X0 211 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 ACSF2Q96CM8 615 aaPredicted RBP12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 AZI2Q9H6S1 392 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 PSTPIP2Q9H939 334 aa12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 MAFBQ9Y5Q3 323 aaPredicted RBP12.75□□□□□ -0.37
SUPT4H1-203ENST00000579289 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 HOXA2O43364 376 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 CNPP09543 421 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZNF484Q5JVG2 852 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 CCDC149Q6ZUS6 474 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 CRYGNQ8WXF5 182 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZNF707Q96C28 371 aaPredicted RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 SFXN1Q9H9B4 322 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 WDR6Q9NNW5 1121 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 RALYQ9UKM9 306 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
SUPT4H1-203ENST00000579289 SHISA7A6NL88 538 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 IFIT3O14879 490 aaKnown RBP12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 LILRB5O75023 590 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 ADRB1P08588 477 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 SRFP11831 508 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 EIF4BP23588 611 aaKnown RBP12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 STARD6P59095 220 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 ODR4Q5SWX8 454 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 CABP7Q86V35 215 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZBTB44Q8NCP5 570 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 CUL5Q93034 780 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 RPP25Q9BUL9 199 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms