RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ADAM33Q9BZ11 813 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CELF4Q9BZC1 486 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TMEM117Q9H0C3 514 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SMARCAD1Q9H4L7 1026 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 VAT1LQ9HCJ6 419 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RGS18Q9NS28 235 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TYW1Q9NV66 732 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TMEM161AQ9NX61 479 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZBTB47Q9UFB7 747 aaPredicted RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PCDHA2Q9Y5H9 948 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 A0A0D9SFI3 127 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SMIM35A0A1B0GVV1 85 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 DENND3A2RUS2 1198 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CARNS1A5YM72 827 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 C2orf71A6NGG8 1288 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KLRF2D3W0D1 207 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TOP3BO95985 862 aaKnown RBP8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PLA2G2AP14555 144 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KCNA2P16389 499 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KRT76Q01546 638 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SP4Q02446 784 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 APOBRQ0VD83 1088 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 BMS1Q14692 1282 aaKnown RBP8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZNF528Q3MIS6 628 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 C19orf48Q6RUI8 117 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KCNT2Q6UVM3 1135 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CCDC149Q6ZUS6 474 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 OTOP3Q7RTS5 596 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TMC7Q7Z402 723 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 LRRC43Q8N309 656 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZBTB44Q8NCP5 570 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GLIS3Q8NEA6 775 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RSPH1Q8WYR4 309 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GLG1Q92896 1179 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZFP91Q96JP5 570 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZKSCAN3Q9BRR0 538 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FAM49AQ9H0Q0 323 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ATP6V0A4Q9HBG4 840 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SPG21Q9NZD8 308 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 IGSF9Q9P2J2 1179 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 WNT16Q9UBV4 365 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 DBR1Q9UK59 544 aaKnown RBP8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FBXL21Q9UKT6 434 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TELO2Q9Y4R8 837 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 IRAK3Q9Y616 596 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 DOCK8Q8NF50 2099 aa8.24□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PALM3A6NDB9 673 aaPredicted RBP8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MGEA5O60502 916 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CLASP2O75122 1294 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RPS6KA5O75582 802 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 C1QL1O75973 258 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 INSRRP14616 1297 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MARK3P27448 753 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PDE1AP54750 535 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FAM189BP81408 668 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RARS2Q5T160 578 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FAM102BQ5T8I3 360 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PRR23CQ6ZRP0 262 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PLEKHM2Q8IWE5 1019 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ADAM2Q99965 735 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RIOX1Q9H6W3 641 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RXFP3Q9NSD7 469 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PCDHGA2Q9Y5H1 932 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PIK3CDO00329 1044 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZNF213O14771 459 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GPR182O15218 404 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NARSO43776 548 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PRB1P04280 392 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FGFR1P11362 822 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SLC26A2P50443 739 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 POLGP54098 1239 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 IGBP1P78318 339 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SRSF1Q07955 248 aaKnown RBP eCLIP8.22□□□□□ -1.093e-9■□□□□ 10.4
CDK5RAP3-209ENST00000578663 NFX1Q12986 1120 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GIT2Q14161 759 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NONOQ15233 471 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 COL28A1Q2UY09 1125 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PHLDB3Q6NSJ2 640 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GPR149Q86SP6 731 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZNF589Q86UQ0 364 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HOMER1Q86YM7 354 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SLC39A11Q8N1S5 342 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NELL1Q92832 810 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FAM227BQ96M60 508 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 UBAC1Q9BSL1 405 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 LSM14BQ9BX40 385 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RHOBTB2Q9BYZ6 727 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SFXN1Q9H9B4 322 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TBC1D17Q9HA65 648 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
CDK5RAP3-209ENST00000578663 RTEL1Q9NZ71 1219 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms