RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 IFT122Q9HBG6 1241 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 KCNMB3Q9NPA1 279 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 XPNPEP1Q9NQW7 623 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 AAASQ9NRG9 546 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 DISC1Q9NRI5 854 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 TPCN1Q9ULQ1 816 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 KCNJ14Q9UNX9 436 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 USP15Q9Y4E8 981 aaPredicted RBP5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 PCDHA10Q9Y5I2 948 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 DENND4AQ7Z401 1863 aa5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 ZFHX2Q9C0A1 2572 aaPredicted RBP5.05□□□□□ -1.6
PPP4R1-209ENST00000578329 DOCK6Q96HP0 2047 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 DMDP11532 3685 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 POTEMA6NI47 508 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 TTLL13PA6NNM8 815 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 TBKBP1A7MCY6 615 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PRR33A8MZF0 331 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 F8W810 466 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 DCXO43602 365 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 LILRB3O75022 631 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 RPS6KA5O75582 802 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 FGF18O76093 207 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PDGFBP01127 241 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 OATP04181 439 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 EDN1P05305 212 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 EIF4BP23588 611 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 USP11P51784 963 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 NPEPPSP55786 919 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 NFX1Q12986 1120 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 SMAD4Q13485 552 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PTPROQ16827 1216 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 Q4G0T1 1027 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 IER5Q5VY09 327 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PLA2G4FQ68DD2 849 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 EFCAB12Q6NXP0 572 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 BLOC1S2Q6QNY1 142 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 RUFY3Q7L099 469 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 ZNF280BQ86YH2 543 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 GSTCDQ8NEC7 633 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PRSS33Q8NF86 280 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 AUTS2Q8WXX7 1259 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 LPPQ93052 612 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 FBXL18Q96ME1 805 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 RIT2Q99578 217 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 SLC26A6Q9BXS9 759 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 FTHL17Q9BXU8 183 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 IGFLR1Q9H665 355 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 AZI2Q9H6S1 392 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 ELAC1Q9H777 363 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 TBC1D22BQ9NU19 505 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 TMEM161AQ9NX61 479 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 DNAJB4Q9UDY4 337 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PRKAG3Q9UGI9 489 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 CD207Q9UJ71 328 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 GINS2Q9Y248 185 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 ARIH1Q9Y4X5 557 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 COL4A3Q01955 1670 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 PLXNA3P51805 1871 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 VPS13AQ96RL7 3174 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 C2orf16Q68DN1 1984 aa5.04□□□□□ -1.6
PPP4R1-209ENST00000578329 CFAP54Q96N23 3096 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 A0A087WWV3 80 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 A0A087WZ62 844 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 A0A0U1RQF3 1178 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 NT5C1B-RDH14C9J2C7 533 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 BACH1O14867 736 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 CHMP2AO43633 222 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 N4BP1O75113 896 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 CLASP2O75122 1294 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 MAFO75444 373 aaPredicted RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 DDHD2O94830 711 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 HMGB1P09429 215 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 WEE2P0C1S8 567 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 IBSPP21815 317 aaPredicted RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 VCPP55072 806 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 PLCB3Q01970 1234 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 NHLH1Q02575 133 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 TCF15Q12870 199 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 NR5A1Q13285 461 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 KRT32Q14532 448 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 AMHR2Q16671 573 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 INF2Q27J81 1249 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 LONRF3Q496Y0 759 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 NAALADL2Q58DX5 795 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 RNF20Q5VTR2 975 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 MIS18BP1Q6P0N0 1132 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 KCNT2Q6UVM3 1135 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 AGMOQ6ZNB7 445 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 TAS1R1Q7RTX1 841 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 RSPH3Q86UC2 560 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 SMAP1Q8IYB5 467 aaPredicted RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 RNF168Q8IYW5 571 aaPredicted RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 BLIDQ8IZY5 108 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 METTL13Q8N6R0 699 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 C12orf76Q8N812 135 aaPredicted RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 SMG8Q8ND04 991 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 HELQQ8TDG4 1101 aa5.03□□□□□ -1.6
PPP4R1-209ENST00000578329 SLC22A17Q8WUG5 538 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms