RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ATP13A4Q4VNC1 1196 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 KLHDC10Q6PID8 442 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 UNQ6494/PRO21346Q6UXR6 183 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 BMP8AQ7Z5Y6 402 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 PRRT2Q7Z6L0 340 aaPredicted RBP6.78□□□□□ -1.32
CDC27-216ENST00000574304 STRA8Q7Z7C7 330 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 ZNF610Q8N9Z0 462 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 GNRHR2Q96P88 292 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 MS4A5Q9H3V2 200 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 IFT22Q9H7X7 185 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 SMPD4Q9NXE4 827 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 OAZ3Q9UMX2 235 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 VWA7Q9Y334 891 aa6.78□□□□□ -1.32
CDC27-216ENST00000574304 MAFGO15525 162 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 SESN2P58004 480 aaPredicted RBP6.77□□□□□ -1.33
CDC27-216ENST00000574304 STRN3Q13033 797 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 ADAM15Q13444 863 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 DDB1Q16531 1140 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 SPATS1Q496A3 300 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 ESPNLQ6ZVH7 1005 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 TAX1BP1Q86VP1 789 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 TTC9BQ8N6N2 239 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 GIMAP8Q8ND71 665 aaPredicted RBP6.77□□□□□ -1.33
CDC27-216ENST00000574304 SLC5A5Q92911 643 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 DYDC2Q96IM9 177 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 ZNF496Q96IT1 587 aaPredicted RBP6.77□□□□□ -1.33
CDC27-216ENST00000574304 TTC1Q99614 292 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 DPYSL5Q9BPU6 564 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 PITHD1Q9GZP4 211 aaPredicted RBP6.77□□□□□ -1.33
CDC27-216ENST00000574304 MTG2Q9H4K7 406 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
CDC27-216ENST00000574304 DENND2AQ9ULE3 1009 aa6.77□□□□□ -1.33
CDC27-216ENST00000574304 A0A0A6YYJ9 748 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 MATN2O00339 956 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 ELL2O00472 640 aaPredicted RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 NEMP1O14524 444 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 H2AFYO75367 372 aaKnown RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 CR2P20023 1033 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 MAGEA10P43363 369 aaPredicted RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 BROXQ5VW32 411 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 CHST13Q8NET6 341 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 OR14K1Q8NGZ2 314 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 CFHR4Q92496 578 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 GFM2Q969S9 779 aaKnown RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 HAPLN2Q9GZV7 340 aa6.76□□□□□ -1.33
CDC27-216ENST00000574304 C12orf65Q9H3J6 166 aaKnown RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 POLR3BQ9NW08 1133 aaPredicted RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 CTDP1Q9Y5B0 961 aaPredicted RBP6.76□□□□□ -1.33
CDC27-216ENST00000574304 ZEB2O60315 1214 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 CDC14BO60729 498 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 OPHN1O60890 802 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 ID4P47928 161 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 HGFACQ04756 655 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 ICAM4Q14773 271 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 TCTN3Q6NUS6 607 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 FRMD7Q6ZUT3 714 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 DNERQ8NFT8 737 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 NKD2Q969F2 451 aaPredicted RBP6.75□□□□□ -1.33
CDC27-216ENST00000574304 FERMT2Q96AC1 680 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 ST6GALNAC2Q9UJ37 374 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 SYNPO2Q9UMS6 1093 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 PRKAB1Q9Y478 270 aa6.75□□□□□ -1.33
CDC27-216ENST00000574304 ST20-MTHFSA0A0A6YYL1 179 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 PATE3B3GLJ2 98 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 KDM1AO60341 852 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 VIL1P09327 827 aaKnown RBP6.74□□□□□ -1.33
CDC27-216ENST00000574304 ZBTB41Q5SVQ8 909 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 KRT26Q7Z3Y9 468 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 CXorf67Q86X51 503 aaPredicted RBP6.74□□□□□ -1.33
CDC27-216ENST00000574304 AFAP1L2Q8N4X5 818 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 LPPQ93052 612 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 WDR92Q96MX6 357 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 NOL10Q9BSC4 688 aaKnown RBP6.74□□□□□ -1.33
CDC27-216ENST00000574304 DNAI1Q9UI46 699 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 APOBEC2Q9Y235 224 aaKnown RBP6.74□□□□□ -1.33
CDC27-216ENST00000574304 NOC2LQ9Y3T9 749 aaKnown RBP6.74□□□□□ -1.33
CDC27-216ENST00000574304 MYPNQ86TC9 1320 aa6.74□□□□□ -1.33
CDC27-216ENST00000574304 FOXS1O43638 330 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 PCDH8O95206 1070 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 CNGA1P29973 690 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 HDGFL2Q7Z4V5 671 aaPredicted RBP6.73□□□□□ -1.33
CDC27-216ENST00000574304 RASSF3Q86WH2 238 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 GCDHQ92947 438 aaPredicted RBP6.73□□□□□ -1.33
CDC27-216ENST00000574304 SLC7A6OSQ96CW6 309 aaPredicted RBP6.73□□□□□ -1.33
CDC27-216ENST00000574304 HIST1H2AHQ96KK5 128 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 HIST1H2AJQ99878 128 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 TMX1Q9H3N1 280 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 MSL2Q9HCI7 577 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 CD248Q9HCU0 757 aa6.73□□□□□ -1.33
CDC27-216ENST00000574304 ZFR2Q9UPR6 939 aaKnown RBP6.73□□□□□ -1.33
CDC27-216ENST00000574304 RBM8AQ9Y5S9 174 aaKnown RBP6.73□□□□□ -1.33
CDC27-216ENST00000574304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.72□□□□□ -1.33
CDC27-216ENST00000574304 PRSS38A1L453 326 aa6.72□□□□□ -1.33
CDC27-216ENST00000574304 C2orf78A6NCI8 922 aa6.72□□□□□ -1.33
CDC27-216ENST00000574304 SLC26A4O43511 780 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms