RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 PPFIA1Q13136 1202 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 TFDP1Q14186 410 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 GRIK4Q16099 956 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 C7orf31Q8N865 590 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 ZNF507Q8TCN5 953 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
CDRT1-206ENST00000571263 TSG101Q99816 390 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDRT1-206ENST00000571263 TMEM206Q9H813 350 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 SLC39A2Q9NP94 309 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
CDRT1-206ENST00000571263 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 TMEM150BA6NC51 233 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 PGK1P00558 417 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 ASGR1P07306 291 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 HSPA1AP0DMV8 641 aaKnown RBP13.16□□□□□ -0.3
CDRT1-206ENST00000571263 HSPA1BP0DMV9 641 aaKnown RBP13.16□□□□□ -0.3
CDRT1-206ENST00000571263 CCNE1P24864 410 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 KLRC1P26715 233 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 NAMPTP43490 491 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 MRE11P49959 708 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 BEX3Q00994 111 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 MYL5Q02045 173 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 PAK1Q13153 545 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 MAPK7Q13164 816 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-206ENST00000571263 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 LHX8Q68G74 356 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 CCSAPQ6IQ19 270 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-206ENST00000571263 EFCAB12Q6NXP0 572 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 MTHFD1LQ6UB35 978 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-206ENST00000571263 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 DAW1Q8N136 415 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 GOLGA5Q8TBA6 731 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
CDRT1-206ENST00000571263 KAT2BQ92831 832 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 XPNPEP1Q9NQW7 623 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
CDRT1-206ENST00000571263 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 CCDC169A6NNP5 214 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 GCNT3O95395 438 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 C22orf31O95567 290 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SMIM10L2AP0DMW4 78 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SMIM10L2BP0DMW5 78 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 EFNA5P52803 228 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 NCKAP1LP55160 1127 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 PEX3P56589 373 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 GTF2BQ00403 316 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 LRRC41Q15345 812 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 KCNA10Q16322 511 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 L1TD1Q5T7N2 865 aaKnown RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SPATA1Q5VX52 437 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 CENPPQ6IPU0 288 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 C11orf57Q6ZUT1 292 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 NME8Q8N427 588 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 KIAA0895Q8NCT3 520 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 P2RX5Q93086 422 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SH2D3AQ9BRG2 576 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 C2orf40Q9H1Z8 148 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SUGCTQ9HAC7 445 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 CBX8Q9HC52 389 aa13.15□□□□□ -0.3
CDRT1-206ENST00000571263 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-206ENST00000571263 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 FSD2A1L4K1 749 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 MBLAC1A4D2B0 266 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-206ENST00000571263 KBTBD13C9JR72 458 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 PDXKO00764 312 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 CALUO43852 315 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-206ENST00000571263 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-206ENST00000571263 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
CDRT1-206ENST00000571263 PTGS1P23219 599 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 NPTX2P47972 431 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 LBX1P52954 281 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 ACLYP53396 1101 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
CDRT1-206ENST00000571263 IQCB1Q15051 598 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms