RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PCDHB7Q9Y5E2 793 aa8.11□□□□□ -1.11
CHD3-213ENST00000571249 GREB1LQ9C091 1923 aaPredicted RBP8.11□□□□□ -1.11
CHD3-213ENST00000571249 GREB1Q4ZG55 1949 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
CHD3-213ENST00000571249 SHISA7A6NL88 538 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 MINDY4BA8MYZ0 360 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 GOLIM4O00461 696 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 GNAI2P04899 355 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 CHGBP05060 677 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 FGFR1P11362 822 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 LAMP2P13473 410 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 SLC16A2P36021 539 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 SP2Q02086 613 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 KRT17Q04695 432 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 PLPP6Q8IY26 295 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 DNAJB3Q8WWF6 145 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 GLG1Q92896 1179 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 FGF14Q92915 247 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 NXPE3Q969Y0 559 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 KLHL5Q96PQ7 755 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 TAAR1Q96RJ0 339 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 API5Q9BZZ5 524 aaKnown RBP8.1□□□□□ -1.11
CHD3-213ENST00000571249 SFXN1Q9H9B4 322 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 PADI3Q9ULW8 664 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 MRVI1Q9Y6F6 885 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 CDY2AQ9Y6F7 541 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 FNDC1Q4ZHG4 1894 aaPredicted RBP8.1□□□□□ -1.11
CHD3-213ENST00000571249 DOPEY2Q9Y3R5 2298 aa8.1□□□□□ -1.11
CHD3-213ENST00000571249 PCNX2A6NKB5 2137 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 NT5C1B-RDH14C9J2C7 533 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 MGEA5O60502 916 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 LGALS2P05162 132 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 GNAT1P11488 350 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 CEACAM1P13688 526 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 LAG3P18627 525 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 ADD2P35612 726 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 MAGEA9P43362 315 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 RPS9P46781 194 aaKnown RBP8.09□□□□□ -1.11
CHD3-213ENST00000571249 SATB1Q01826 763 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 PRKCQQ04759 706 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 STXBP2Q15833 593 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 TMEM266Q2M3C6 531 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 TMEM259Q4ZIN3 620 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 SBK1Q52WX2 424 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 HEATR6Q6AI08 1181 aaKnown RBP8.09□□□□□ -1.11
CHD3-213ENST00000571249 PARM1Q6UWI2 310 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 TRIM50Q86XT4 487 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 ZBTB10Q96DT7 871 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
CHD3-213ENST00000571249 USP26Q9BXU7 913 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 WDR6Q9NNW5 1121 aaKnown RBP8.09□□□□□ -1.11
CHD3-213ENST00000571249 COL20A1Q9P218 1284 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 TELO2Q9Y4R8 837 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 MYH4Q9Y623 1939 aa8.09□□□□□ -1.11
CHD3-213ENST00000571249 NRCAMQ92823 1304 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 BCAR3O75815 825 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 GGPS1O95749 300 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 TSPY3P0CV98 308 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 TSPY8P0CW00 308 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 SARSP49591 514 aaKnown RBP8.08□□□□□ -1.12
CHD3-213ENST00000571249 KCNC4Q03721 635 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 TMEM62Q0P6H9 643 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 CCDC96Q2M329 555 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 PLA2G2CQ5R387 149 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 CELF3Q5SZQ8 465 aaKnown RBP8.08□□□□□ -1.12
CHD3-213ENST00000571249 TPRG1Q6ZUI0 275 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 CEP68Q76N32 757 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 AACSQ86V21 672 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 CHCHD4Q8N4Q1 142 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 TMEM87AQ8NBN3 555 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 DEFB124Q8NES8 71 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 MDM1Q8TC05 714 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 UBL7Q96S82 380 aaPredicted RBP8.08□□□□□ -1.12
CHD3-213ENST00000571249 FTHL17Q9BXU8 183 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 SPG21Q9NZD8 308 aa8.08□□□□□ -1.12
CHD3-213ENST00000571249 ASCC3Q8N3C0 2202 aaKnown RBP8.07□□□□□ -1.12
CHD3-213ENST00000571249 CLUHO75153 1309 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 FLNCQ14315 2725 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 CCDC195A0A1B0GUA6 201 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 TK2O00142 265 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
CHD3-213ENST00000571249 TFAP4Q01664 338 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 VPS52Q8N1B4 723 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 ZNF687Q8N1G0 1237 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 SLC39A11Q8N1S5 342 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 NSUN6Q8TEA1 469 aaKnown RBP8.07□□□□□ -1.12
CHD3-213ENST00000571249 DDX12PQ92771 950 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
CHD3-213ENST00000571249 ZNF558Q96NG5 402 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 EDEM2Q9BV94 578 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 ZNF287Q9HBT7 754 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 FBN2P35556 2912 aa8.07□□□□□ -1.12
CHD3-213ENST00000571249 SPAARA0A1B0GVQ0 90 aa8.06□□□□□ -1.12
CHD3-213ENST00000571249 FAM221BA6H8Z2 402 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms