RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RASSF8Q8NHQ8 419 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 GRAPLQ8TC17 118 aaPredicted RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 ZNF606Q8WXB4 792 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 NACC2Q96BF6 587 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CLIP3Q96DZ5 547 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 ASIC4Q96FT7 647 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 RBM18Q96H35 190 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 ALPK1Q96QP1 1244 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 BARD1Q99728 777 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 DSCC1Q9BVC3 393 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CFHR5Q9BXR6 569 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 SENP2Q9HC62 589 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 ST7Q9NRC1 585 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 DISC1Q9NRI5 854 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 HPF1Q9NWY4 346 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 NSMCE4AQ9NXX6 385 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 RABGEF1Q9UJ41 708 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 GPR52Q9Y2T5 361 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 MRPL11Q9Y3B7 192 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 ANGPTL3Q9Y5C1 460 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CYP46A1Q9Y6A2 500 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 NEDD4P46934 1319 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CYP2D7A0A087X1C5 515 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 GOLGA6L10A0A0M3HER8 536 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 LINC00854A0A1B0GVQ3 168 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 AKR1B15C9JRZ8 316 aaPredicted RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 H0YHG0 523 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 M0R3H8 397 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 MASP2O00187 686 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 NDC80O14777 642 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 AREL1O15033 823 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 SPTLC2O15270 562 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 KLHL41O60662 606 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 JAK2O60674 1132 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 MAFKO60675 156 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 UFL1O94874 794 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 CPP00450 1065 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 MMP10P09238 476 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 THEGLP0DJG4 465 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 CYP7A1P22680 504 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PRDX5P30044 214 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 CHRNA5P30532 468 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 MCM4P33991 863 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 RDXP35241 583 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 CHKAP35790 457 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 TNNT3P45378 269 aaPredicted RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 EIF1AXP47813 144 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 TM4SF4P48230 202 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 RBM5P52756 815 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMG6-208ENST00000570874 ANTXR2P58335 489 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 USP46P62068 366 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 ST5P78524 1137 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PPFIA1Q13136 1202 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PABPC4Q13310 644 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMG6-208ENST00000570874 PRPF4BQ13523 1007 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 RASA2Q15283 850 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 UBE3CQ15386 1083 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 OASLQ15646 514 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 SLC14A2Q15849 920 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PTPN21Q16825 1174 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 TSGA10IPQ3SY00 556 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 CRY2Q49AN0 593 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 C5orf22Q49AR2 442 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 ARHGAP29Q52LW3 1261 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 SETMARQ53H47 684 aaPredicted RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 MEI1Q5TIA1 1274 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 RNF20Q5VTR2 975 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 TATDN1Q6P1N9 297 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PADI6Q6TGC4 694 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 CLEC17AQ6ZS10 378 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 CYB5R4Q7L1T6 521 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 SH3RF1Q7Z6J0 888 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 LAPTM4BQ86VI4 370 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 SLC41A1Q8IVJ1 513 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 CCDC116Q8IYX3 515 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 SUN5Q8TC36 379 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 HDAC7Q8WUI4 952 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 SDR42E1Q8WUS8 393 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 FERMT2Q96AC1 680 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 TRIM11Q96F44 468 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 RADILQ96JH8 1075 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 ZFRQ96KR1 1074 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 SPATA17Q96L03 361 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 MMTAG2Q9BU76 263 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 TM6SF1Q9BZW5 370 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 MYLK2Q9H1R3 596 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 DOCK5Q9H7D0 1870 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 AGO4Q9HCK5 861 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 KBTBD4Q9NVX7 518 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 ACTR10Q9NZ32 417 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 POLLQ9UGP5 575 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PFDN2Q9UHV9 154 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 TSR3Q9UJK0 312 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 TRHDEQ9UKU6 1024 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 BARX2Q9UMQ3 279 aaPredicted RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 HPS5Q9UPZ3 1129 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 TMEM98Q9Y2Y6 226 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 NOSIPQ9Y314 301 aaKnown RBP3.91□□□□□ -1.78
SMG6-208ENST00000570874 KIAA1217Q5T5P2 1943 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms