RNA–Protein interactions for RNA: ENST00000570193.5

PKD1-239, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-239ENST00000570193 IGKV6-21A0A0C4DH24 114 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 DGKIO75912 1065 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 SLITRK3O94933 977 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 DARSP14868 501 aaKnown RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 POU3F3P20264 500 aaPredicted RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 RFC5P40937 340 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 SARSP49591 514 aaKnown RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 SLC24A5Q71RS6 500 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 RHPN2Q8IUC4 686 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 ZNF579Q8NAF0 562 aaKnown RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 RGS18Q9NS28 235 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
PKD1-239ENST00000570193 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 PPME1Q9Y570 386 aa17.28■□□□□ 0.36
PKD1-239ENST00000570193 A0A087WZ62 844 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 H3BQV1 296 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 GJB2P29033 226 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 CTNNB1P35222 781 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 TECP42680 631 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 TRAPPC10P48553 1259 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
PKD1-239ENST00000570193 PAN2Q504Q3 1202 aaKnown RBP17.27■□□□□ 0.36
PKD1-239ENST00000570193 NLRP4Q96MN2 994 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
PKD1-239ENST00000570193 BACH2Q9BYV9 841 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
PKD1-239ENST00000570193 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.27■□□□□ 0.36
PKD1-239ENST00000570193 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.35
PKD1-239ENST00000570193 POTEMA6NI47 508 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 ZBTB39O15060 712 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 LPXNO60711 386 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 CSDE1O75534 798 aaKnown RBP17.26■□□□□ 0.35
PKD1-239ENST00000570193 FGFR4P22455 802 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 U2AF2P26368 475 aaKnown RBP eCLIP17.26■□□□□ 0.35
PKD1-239ENST00000570193 GPM6BQ13491 265 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 KSR1Q8IVT5 923 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
PKD1-239ENST00000570193 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 ZNF689Q96CS4 500 aaPredicted RBP17.26■□□□□ 0.35
PKD1-239ENST00000570193 HSD17B14Q9BPX1 270 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 INO80BQ9C086 356 aaPredicted RBP17.26■□□□□ 0.35
PKD1-239ENST00000570193 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 RWDD3Q9Y3V2 267 aa17.26■□□□□ 0.35
PKD1-239ENST00000570193 C9IYK1 514 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 GATMP50440 423 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 DSC3Q14574 896 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 NBR1Q14596 966 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 EMC2Q15006 297 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 ZNF410Q86VK4 478 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 CMTR2Q8IYT2 770 aaKnown RBP17.25■□□□□ 0.35
PKD1-239ENST00000570193 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 TCP11Q8WWU5 503 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 DHX33Q9H6R0 707 aaKnown RBP17.25■□□□□ 0.35
PKD1-239ENST00000570193 ATP6V0A4Q9HBG4 840 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 ANKEF1Q9NU02 776 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 THEGQ9P2T0 379 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 TTC3P53804 2025 aa17.25■□□□□ 0.35
PKD1-239ENST00000570193 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
PKD1-239ENST00000570193 LYPLA2O95372 231 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 SRGAP2CP0DJJ0 459 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 SFPQP23246 707 aaKnown RBP eCLIP17.24■□□□□ 0.35
PKD1-239ENST00000570193 BMPR1AP36894 532 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 PTPROQ16827 1216 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 SPOUT1Q5T280 376 aaKnown RBP17.24■□□□□ 0.35
PKD1-239ENST00000570193 CRIPAKQ8N1N5 446 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 PRPF31Q8WWY3 499 aaKnown RBP17.24■□□□□ 0.35
PKD1-239ENST00000570193 MTRQ99707 1265 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 RC3H2Q9HBD1 1191 aaKnown RBP17.24■□□□□ 0.35
PKD1-239ENST00000570193 TUFT1Q9NNX1 390 aa17.24■□□□□ 0.35
PKD1-239ENST00000570193 A0A087WWV3 80 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 TBKBP1A7MCY6 615 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 H3BNC9 293 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 RB1P06400 928 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 CATSPER4Q7RTX7 472 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 RNF169Q8NCN4 708 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 C11orf84Q9BUA3 381 aaPredicted RBP17.23■□□□□ 0.35
PKD1-239ENST00000570193 TMEM161AQ9NX61 479 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 PCDHB6Q9Y5E3 794 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
PKD1-239ENST00000570193 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
PKD1-239ENST00000570193 DLL1O00548 723 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 ASAP2O43150 1006 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 FGFR1P11362 822 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 TOB1P50616 345 aaPredicted RBP17.22■□□□□ 0.35
PKD1-239ENST00000570193 FAM189BP81408 668 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 PTGDRQ13258 359 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 FAM102BQ5T8I3 360 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
PKD1-239ENST00000570193 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
PKD1-239ENST00000570193 ABI1Q8IZP0 508 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms