RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 YWHABP31946 246 aaKnown RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 NPEPPSP55786 919 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 CDC42EP1Q00587 391 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 SPIRE1Q08AE8 756 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 BTG3Q14201 252 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 SKIV2LQ15477 1246 aaKnown RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 FIBCD1Q8N539 461 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 FBXO22Q8NEZ5 403 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 SP7Q8TDD2 431 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 GDPD5Q8WTR4 605 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 SLC7A3Q8WY07 619 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 MTMR9Q96QG7 549 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 ADAM2Q99965 735 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 EIF2AK1Q9BQI3 630 aaKnown RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 ADAMTS10Q9H324 1103 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 SUCLA2Q9P2R7 463 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 WRAP73Q9P2S5 460 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 PCDHB7Q9Y5E2 793 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 MTCH2Q9Y6C9 303 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 GPC3P51654 580 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 POLGP54098 1239 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-225ENST00000569245 DRP2Q13474 957 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 EPC2Q52LR7 807 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 XKR9Q5GH70 373 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 FAM43BQ6ZT52 329 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-225ENST00000569245 RHPN2Q8IUC4 686 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 NPAS4Q8IUM7 802 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 C4orf19Q8IY42 314 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 EXOC8Q8IYI6 725 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 SAMD11Q96NU1 681 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 GBP4Q96PP9 640 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 GCOM2Q9BZD3 368 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-225ENST00000569245 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 C1orf112Q9NSG2 853 aa16.16■□□□□ 0.18
COMMD4-225ENST00000569245 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-225ENST00000569245 TRANK1O15050 2925 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 MYH9P35579 1960 aaKnown RBP16.15■□□□□ 0.18
COMMD4-225ENST00000569245 IGKV6-21A0A0C4DH24 114 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 MGEA5O60502 916 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 DGKIO75912 1065 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 SLITRK3O94933 977 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 ZSCAN20P17040 1043 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-225ENST00000569245 RFC5P40937 340 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 SARSP49591 514 aaKnown RBP16.15■□□□□ 0.18
COMMD4-225ENST00000569245 MYO9BQ13459 2157 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 SLC24A5Q71RS6 500 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 TMEM192Q8IY95 271 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
COMMD4-225ENST00000569245 NEK9Q8TD19 979 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 CCDC43Q96MW1 224 aaKnown RBP16.15■□□□□ 0.18
COMMD4-225ENST00000569245 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-225ENST00000569245 PPME1Q9Y570 386 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 ADGRA3Q8IWK6 1321 aa16.15■□□□□ 0.18
COMMD4-225ENST00000569245 MICAL3Q7RTP6 2002 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 ZBTB39O15060 712 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 LPXNO60711 386 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
COMMD4-225ENST00000569245 OR52Z1P0C646 297 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 DARSP14868 501 aaKnown RBP16.14■□□□□ 0.17
COMMD4-225ENST00000569245 POU3F3P20264 500 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-225ENST00000569245 CTNNB1P35222 781 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 TECP42680 631 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 TRAPPC10P48553 1259 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 DNM1Q05193 864 aaKnown RBP16.14■□□□□ 0.17
COMMD4-225ENST00000569245 PAN2Q504Q3 1202 aaKnown RBP16.14■□□□□ 0.17
COMMD4-225ENST00000569245 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 TMEM143Q96AN5 459 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 NLRP4Q96MN2 994 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 ZNF396Q96N95 335 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-225ENST00000569245 HSD17B14Q9BPX1 270 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 PRDM6Q9NQX0 595 aa16.14■□□□□ 0.17
COMMD4-225ENST00000569245 PTPRSQ13332 1948 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 A0A087WZ62 844 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 POTEMA6NI47 508 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 FGFR4P22455 802 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 KRT85P78386 507 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 ORC2Q13416 577 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-225ENST00000569245 GPM6BQ13491 265 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 KSR1Q8IVT5 923 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-225ENST00000569245 INO80BQ9C086 356 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-225ENST00000569245 CFAP45Q9UL16 551 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 RWDD3Q9Y3V2 267 aa16.13■□□□□ 0.17
COMMD4-225ENST00000569245 SRGAP2CP0DJJ0 459 aa16.12■□□□□ 0.17
COMMD4-225ENST00000569245 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
COMMD4-225ENST00000569245 GATMP50440 423 aa16.12■□□□□ 0.17
COMMD4-225ENST00000569245 NBR1Q14596 966 aa16.12■□□□□ 0.17
COMMD4-225ENST00000569245 EMC2Q15006 297 aa16.12■□□□□ 0.17
COMMD4-225ENST00000569245 PTPROQ16827 1216 aa16.12■□□□□ 0.17
COMMD4-225ENST00000569245 FOXD4L6Q3SYB3 417 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-225ENST00000569245 FOXD4L3Q6VB84 417 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-225ENST00000569245 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
COMMD4-225ENST00000569245 CMTR2Q8IYT2 770 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms