RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-216	ENST00000569151	PCDH11X	Q9BZA7	1347 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MEGF6	O75095	1541 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LRRD1	A4D1F6	860 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TRIM49B	A6NDI0	452 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LRRC53	A6NM62	1247 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ENO4	A6NNW6	628 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	GSG1L2	A8MUP6	293 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ATP5J2-PTCD1	G3V325	749 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151		M0R2N6	131 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PTCD1	O75127	700 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PALM	O75781	387 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MBD4	O95243	580 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	EYA4	O95677	639 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	GGPS1	O95749	300 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MYC	P01106	439 aa	Predicted RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MME	P08473	750 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ZBTB48	P10074	688 aa	Predicted RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ATP6V1C1	P21283	382 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	FGFR2	P21802	821 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	CASP1	P29466	404 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	UBA7	P41226	1012 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	GRM5	P41594	1212 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PRKCI	P41743	596 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PAPOLA	P51003	745 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PMS1	P54277	932 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PTEN	P60484	403 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MAGOH	P61326	146 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TROAP	Q12815	778 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TCIRG1	Q13488	830 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	E2F5	Q15329	346 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	SKIDA1	Q1XH10	827 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TSNAXIP1	Q2TAA8	658 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	METTL24	Q5JXM2	366 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ANKRD20A2	Q5SQ80	823 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	WASHC2D	Q5SRD0	308 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ANKRD20A1	Q5TYW2	823 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	SFMBT2	Q5VUG0	894 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ANKRD20A3	Q5VUR7	823 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	RNF43	Q68DV7	783 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	IRGC	Q6NXR0	463 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LRRC55	Q6ZSA7	311 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TRIM67	Q6ZTA4	783 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	UNC13D	Q70J99	1090 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ASRGL1	Q7L266	308 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	KRT26	Q7Z3Y9	468 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	SEPT12	Q8IYM1	358 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	AGGF1	Q8N302	714 aa	eCLIP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ARHGAP18	Q8N392	663 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	SRBD1	Q8N5C6	995 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	NBPF15	Q8N660	670 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ENDOV	Q8N8Q3	282 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LRRC57	Q8N9N7	239 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	FBF1	Q8TES7	1133 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	IFT81	Q8WYA0	676 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LZIC	Q8WZA0	190 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	INPP5D	Q92835	1189 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MAGOHB	Q96A72	148 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LRRC59	Q96AG4	307 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	SHISA4	Q96DD7	197 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	NAF1	Q96HR8	494 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	CDK15	Q96Q40	435 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TSG101	Q99816	390 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PAIP2	Q9BPZ3	127 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	MYL10	Q9BUA6	226 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	BRIP1	Q9BX63	1249 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	CARD9	Q9H257	536 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	BLZF1	Q9H2G9	400 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	VCX	Q9H320	206 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PABPC3	Q9H361	631 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	VRTN	Q9H8Y1	702 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	RNPEPL1	Q9HAU8	725 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	RXFP1	Q9HBX9	757 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	INCENP	Q9NQS7	918 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	TXLNG	Q9NUQ3	528 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	USP40	Q9NVE5	1235 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	RASAL2	Q9UJF2	1139 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	NENF	Q9UMX5	172 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	PCDHA4	Q9UN74	947 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	NOVA2	Q9UNW9	492 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	NOD1	Q9Y239	953 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ARL2BP	Q9Y2Y0	163 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	USP15	Q9Y4E8	981 aa	Predicted RBP	4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	LRRC42	Q9Y546	428 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	ACTL7B	Q9Y614	415 aa		4.99	□□□□□ -1.61
BBS4-216	ENST00000569151	SPATA31A3	Q5VYP0	1347 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	ERVV-2	B6SEH9	535 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	hCG_1984214	I3L0E3	225 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	TRAFD1	O14545	582 aa	Predicted RBP	4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	OPLAH	O14841	1288 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	PPP1R12B	O60237	982 aa	Predicted RBP	4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	GDF9	O60383	454 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	TOM1	O60784	492 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	HIP1R	O75146	1068 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	LGR5	O75473	907 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	TCEA3	O75764	348 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	IDH1	O75874	414 aa	Known RBP	4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	UNC5C	O95185	931 aa		4.98	□□□□□ -1.61
BBS4-216	ENST00000569151	PDE8B	O95263	885 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms