RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 RHOBTB2Q9BYZ6 727 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 DIAPH3Q9NSV4 1193 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 FBXO4Q9UKT5 387 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 CEP131Q9UPN4 1083 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 SSX2IPQ9Y2D8 614 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 PCDHGA2Q9Y5H1 932 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 CACNA1GO43497 2377 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 MYH7BA7E2Y1 1941 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 ACACBO00763 2458 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 A0A0U1RQF3 1178 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 BACH1O14867 736 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 IFIT3O14879 490 aaKnown RBP9.88□□□□□ -0.83
SMG1-216ENST00000569122 MAGEB2O15479 319 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 ATG7O95352 703 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 EPCAMP16422 314 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 KLRC2P26717 231 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 MAGEA9P43362 315 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 METAP2P50579 478 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMG1-216ENST00000569122 CDC42EP1Q00587 391 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 WTAPQ15007 396 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 KIZQ2M2Z5 673 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 SPECC1Q5M775 1068 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 SLC44A3Q8N4M1 653 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 DCLK2Q8N568 766 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 SUMF1Q8NBK3 374 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 RNF169Q8NCN4 708 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 CTCFLQ8NI51 663 aaPredicted RBP9.88□□□□□ -0.83
SMG1-216ENST00000569122 TMEM40Q8WWA1 233 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 MAP7D2Q96T17 732 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 OSMRQ99650 979 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 BCO2Q9BYV7 579 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 ZBP1Q9H171 429 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 KCNH7Q9NS40 1196 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMG1-216ENST00000569122 PKD2L1Q9P0L9 805 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 EPS15L1Q9UBC2 864 aa9.88□□□□□ -0.83
SMG1-216ENST00000569122 LAMTOR5O43504 91 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 GPR32O75388 356 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 DCNP07585 359 aaKnown RBP9.87□□□□□ -0.83
SMG1-216ENST00000569122 ADRB1P08588 477 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 EIF4BP23588 611 aaKnown RBP9.87□□□□□ -0.83
SMG1-216ENST00000569122 GBP2P32456 591 aaPredicted RBP9.87□□□□□ -0.83
SMG1-216ENST00000569122 PBX3P40426 434 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 TROAPQ12815 778 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 PTPN14Q15678 1187 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 C20orf194Q5TEA3 1177 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 DCLRE1AQ6PJP8 1040 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 CWC27Q6UX04 472 aaKnown RBP9.87□□□□□ -0.83
SMG1-216ENST00000569122 METTL13Q8N6R0 699 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 PIBF1Q8WXW3 757 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
SMG1-216ENST00000569122 IGSF21Q96ID5 467 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 MXRA8Q9BRK3 442 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 WDR6Q9NNW5 1121 aaKnown RBP9.87□□□□□ -0.83
SMG1-216ENST00000569122 ARHGEF3Q9NR81 526 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 CHST12Q9NRB3 414 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 CA14Q9ULX7 337 aa9.87□□□□□ -0.83
SMG1-216ENST00000569122 ATG2AQ2TAZ0 1938 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 IGKV6D-21A0A0A0MT36 114 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 TBC1D4O60343 1298 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 ZC3H11AO75152 810 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMG1-216ENST00000569122 C1RP00736 705 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 CLCN4P51793 760 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 RNASELQ05823 741 aaKnown RBP9.86□□□□□ -0.83
SMG1-216ENST00000569122 SLC35G1Q2M3R5 365 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 MIS18BP1Q6P0N0 1132 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 GLB1LQ6UWU2 654 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 RALYLQ86SE5 291 aaKnown RBP9.86□□□□□ -0.83
SMG1-216ENST00000569122 CKAP2LQ8IYA6 745 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 PJA1Q8NG27 643 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 HELQQ8TDG4 1101 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 DDX1Q92499 740 aaKnown RBP9.86□□□□□ -0.83
SMG1-216ENST00000569122 ZNF302Q9NR11 478 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 SLC2A4RGQ9NR83 387 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 MRPL17Q9NRX2 175 aaKnown RBP9.86□□□□□ -0.83
SMG1-216ENST00000569122 RNF19AQ9NV58 838 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 DLGAP2Q9P1A6 1054 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 TCEAL9Q9UHQ7 104 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 PCDHA6Q9UN73 950 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 PCDHA8Q9Y5H6 950 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
SMG1-216ENST00000569122 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
SMG1-216ENST00000569122 ZFHX4Q86UP3 3567 aa9.86□□□□□ -0.83
SMG1-216ENST00000569122 NT5C1B-RDH14C9J2C7 533 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 NCAM2O15394 837 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 NARSO43776 548 aaKnown RBP9.85□□□□□ -0.83
SMG1-216ENST00000569122 FOSP01100 380 aaPredicted RBP9.85□□□□□ -0.83
SMG1-216ENST00000569122 ADH1AP07327 375 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 NLRP11P59045 1033 aaKnown RBP9.85□□□□□ -0.83
SMG1-216ENST00000569122 STARD6P59095 220 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 DMWDQ09019 674 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 CEP55Q53EZ4 464 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 CLLU1OSQ5K130 101 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 KANK3Q6NY19 840 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 ABHD15Q6UXT9 468 aa9.85□□□□□ -0.83
SMG1-216ENST00000569122 CYB5R4Q7L1T6 521 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms