RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 GLRBP48167 497 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 USP14P54578 494 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 ADKP55263 362 aaKnown RBP7.41□□□□□ -1.22
UBR1-208ENST00000569066 RTP5Q14D33 572 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 CYB5RLQ6IPT4 315 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 GAREM2Q75VX8 874 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 RIN2Q8WYP3 895 aaPredicted RBP7.41□□□□□ -1.22
UBR1-208ENST00000569066 OR14I1A6ND48 311 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 OFD1O75665 1012 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 C8BP07358 591 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 EXOC8Q8IYI6 725 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 THEMISQ8N1K5 641 aaPredicted RBP7.41□□□□□ -1.22
UBR1-208ENST00000569066 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 SARGQ9BW04 601 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 RCAN3Q9UKA8 241 aa7.41□□□□□ -1.22
UBR1-208ENST00000569066 LOC102724159A0A0B4J2E5 919 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 CTNND1O60716 968 aaKnown RBP7.4□□□□□ -1.22
UBR1-208ENST00000569066 OPHN1O60890 802 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 IL18BPO95998 194 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 EDNRBP24530 442 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 VIPR1P32241 457 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 IL13RA1P78552 427 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 PWP2Q15269 919 aaKnown RBP7.4□□□□□ -1.22
UBR1-208ENST00000569066 C3orf36Q3SXR2 165 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 ATAT1Q5SQI0 421 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 COL23A1Q86Y22 540 aaPredicted RBP7.4□□□□□ -1.22
UBR1-208ENST00000569066 HPS3Q969F9 1004 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 TACO1Q9BSH4 297 aaKnown RBP7.4□□□□□ -1.22
UBR1-208ENST00000569066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBR1-208ENST00000569066 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
UBR1-208ENST00000569066 U2AF1L5P0DN76 240 aaPredicted RBP7.4□□□□□ -1.23
UBR1-208ENST00000569066 TRIM27P14373 513 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 HSPA6P17066 643 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 FBLN1P23142 703 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 U2AF1Q01081 240 aaKnown RBP eCLIP7.4□□□□□ -1.23
UBR1-208ENST00000569066 COBLL1Q53SF7 1204 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 VASNQ6EMK4 673 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 GAB3Q8WWW8 586 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 DPF2Q92785 391 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 E2F7Q96AV8 911 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 FDXACB1Q9BRP7 624 aaPredicted RBP7.4□□□□□ -1.23
UBR1-208ENST00000569066 ACE2Q9BYF1 805 aaPredicted RBP7.4□□□□□ -1.23
UBR1-208ENST00000569066 GALNT8Q9NY28 637 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 CDY2AQ9Y6F7 541 aa7.4□□□□□ -1.23
UBR1-208ENST00000569066 PDCP20941 246 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 SPIDRQ14159 915 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 OR14C36Q8NHC7 312 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 RAX2Q96IS3 184 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 ERC2O15083 957 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 MTHFD2P13995 350 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 AFMP43652 599 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 SLC5A3P53794 718 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 NKX3-2P78367 333 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 ZNF605Q86T29 641 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 IGDCC4Q8TDY8 1250 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 DDX11Q96FC9 970 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 PCDHB6Q9Y5E3 794 aa7.39□□□□□ -1.23
UBR1-208ENST00000569066 ECE1P42892 770 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 ADRM1Q16186 407 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 KANK2Q63ZY3 851 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 OVCH2Q7RTZ1 564 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 PJA1Q8NG27 643 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 OR2I1PQ8NGU4 316 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 SLC6A17Q9H1V8 727 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 OR10A5Q9H207 317 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 ZFP69BQ9UJL9 534 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 INTUQ9ULD6 942 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 CCDC154A6NI56 674 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 TPP1O14773 563 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 ALDH2P05091 517 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 ENO2P09104 434 aaPredicted RBP7.38□□□□□ -1.23
UBR1-208ENST00000569066 ANTXR2P58335 489 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 YBX1P67809 324 aaKnown RBP7.38□□□□□ -1.23
UBR1-208ENST00000569066 MALLQ13021 153 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 USP45Q70EL2 814 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 CAMKK1Q8N5S9 505 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 STPG3Q8N7X2 389 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 DTX3Q8N9I9 347 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 SVIPQ8NHG7 77 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 PARD3BQ8TEW8 1205 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 NRG4Q8WWG1 115 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 NOL10Q9BSC4 688 aaKnown RBP7.38□□□□□ -1.23
UBR1-208ENST00000569066 RNF38Q9H0F5 515 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 HSPBP1Q9NZL4 362 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 IPPQ9Y573 584 aa7.38□□□□□ -1.23
UBR1-208ENST00000569066 HTRA2O43464 458 aaPredicted RBP7.37□□□□□ -1.23
UBR1-208ENST00000569066 ATF2P15336 505 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 AKAP5P24588 427 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 ADCY8P40145 1251 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 PURAQ00577 322 aaKnown RBP7.37□□□□□ -1.23
UBR1-208ENST00000569066 CD83Q01151 205 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 GLB1L3Q8NCI6 653 aaPredicted RBP7.37□□□□□ -1.23
UBR1-208ENST00000569066 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 CALML6Q8TD86 181 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 SSH1Q8WYL5 1049 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 RAB24Q969Q5 203 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 MAP3K14Q99558 947 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 PITHD1Q9GZP4 211 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms