RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 BRMS1Q9HCU9 246 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 PIH1D3Q9NQM4 214 aaKnown RBP6.8□□□□□ -1.32
CDH13-211ENST00000568770 STARD7Q9NQZ5 370 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 NRBP1Q9UHY1 535 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 MSRAQ9UJ68 235 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 TBX21Q9UL17 535 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 ROBO3Q96MS0 1386 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 PIEZO1Q92508 2521 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 USP34Q70CQ2 3546 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 MYH7P12883 1935 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 C5orf42Q9H799 3197 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 SYNRGQ9UMZ2 1314 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 PNMA6EA0A0J9YXQ4 647 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 MSTNO14793 375 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 GAS2O43903 313 aaKnown RBP6.79□□□□□ -1.32
CDH13-211ENST00000568770 RNGTTO60942 597 aaKnown RBP6.79□□□□□ -1.32
CDH13-211ENST00000568770 IDH1O75874 414 aaKnown RBP6.79□□□□□ -1.32
CDH13-211ENST00000568770 FLOT1O75955 427 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 GNAI3P08754 354 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 ZNF865P0CJ78 1059 aaPredicted RBP6.79□□□□□ -1.32
CDH13-211ENST00000568770 AKR1A1P14550 325 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 MAP4P27816 1152 aaKnown RBP6.79□□□□□ -1.32
CDH13-211ENST00000568770 USP11P51784 963 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 KCNQ1P51787 676 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 SLFN5Q08AF3 891 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 PPIGQ13427 754 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDH13-211ENST00000568770 MPP2Q14168 576 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 KCNA10Q16322 511 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 TNNI3KQ59H18 835 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 ZBTB37Q5TC79 503 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 CCSAPQ6IQ19 270 aaPredicted RBP6.79□□□□□ -1.32
CDH13-211ENST00000568770 CCDC174Q6PII3 467 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 REC114Q7Z4M0 266 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 CERS3Q8IU89 383 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 SPICE1Q8N0Z3 855 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 SHISA5Q8N114 240 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 TMEM199Q8N511 208 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 MAGEB6Q8N7X4 407 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 ISL2Q96A47 359 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 ATG4CQ96DT6 458 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 MMP19Q99542 508 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 DBNDD2Q9BQY9 259 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 ATXN3LQ9H3M9 355 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 SEMA6CQ9H3T2 930 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 CCSER2Q9H7U1 834 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 FPGT-TNNI3KV9GXZ4 949 aa6.79□□□□□ -1.32
CDH13-211ENST00000568770 MROH7Q68CQ1 1323 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 PTPRSQ13332 1948 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 HMX2A2RU54 273 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 MYADML2A6NDP7 307 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 ANP32CO43423 234 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 IGSF3O75054 1194 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 SLC25A27O95847 323 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 CDK7P50613 346 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 APOBRQ0VD83 1088 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 KCTD2Q14681 263 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 TMEM132BQ14DG7 1078 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 RAB30Q15771 203 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 UVSSAQ2YD98 709 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 ZNF792Q3KQV3 632 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 PSRC1Q6PGN9 363 aaPredicted RBP6.78□□□□□ -1.32
CDH13-211ENST00000568770 CLEC10AQ8IUN9 316 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 SLITRK4Q8IW52 837 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 KLHDC9Q8NEP7 349 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 EZH1Q92800 747 aaPredicted RBP6.78□□□□□ -1.32
CDH13-211ENST00000568770 ZNF512BQ96KM6 892 aaPredicted RBP6.78□□□□□ -1.32
CDH13-211ENST00000568770 GLT1D1Q96MS3 346 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 LRFN3Q9BTN0 628 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 LRRC3Q9BY71 257 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 KCNF1Q9H3M0 494 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 EPHX3Q9H6B9 360 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 SLC28A3Q9HAS3 691 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 CAPN10Q9HC96 672 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 CNPY2Q9Y2B0 182 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 DIS3Q9Y2L1 958 aaKnown RBP6.78□□□□□ -1.32
CDH13-211ENST00000568770 YBX2Q9Y2T7 364 aaKnown RBP6.78□□□□□ -1.32
CDH13-211ENST00000568770 TRIP12Q14669 1992 aaPredicted RBP6.78□□□□□ -1.32
CDH13-211ENST00000568770 BRWD1Q9NSI6 2320 aa6.78□□□□□ -1.32
CDH13-211ENST00000568770 COL4A4P53420 1690 aaPredicted RBP6.77□□□□□ -1.32
CDH13-211ENST00000568770 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.77□□□□□ -1.33
CDH13-211ENST00000568770 FANCGO15287 622 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 BPNT1O95861 308 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 GNAI2P04899 355 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 ASGR1P07306 291 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 CYP2C18P33260 490 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 RABGGTBP53611 331 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 CLCQ05315 142 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 GABPAQ06546 454 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 NKG7Q16617 165 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 RSPO4Q2I0M5 234 aaPredicted RBP6.77□□□□□ -1.33
CDH13-211ENST00000568770 AAK1Q2M2I8 961 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 SEZ6L2Q6UXD5 910 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 PRR23CQ6ZRP0 262 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 BEND4Q6ZU67 534 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 OTOP2Q7RTS6 562 aa6.77□□□□□ -1.33
CDH13-211ENST00000568770 RIOX2Q8IUF8 465 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms