RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 RALGAPA2Q2PPJ7 1873 aa32.93■■■□□ 2.86
RAB40C-211ENST00000568586 DENND3A2RUS2 1198 aa32.92■■■□□ 2.86
RAB40C-211ENST00000568586 ST18O60284 1047 aa32.92■■■□□ 2.86
RAB40C-211ENST00000568586 LYPLA2O95372 231 aa32.92■■■□□ 2.86
RAB40C-211ENST00000568586 ORC2Q13416 577 aaPredicted RBP32.92■■■□□ 2.86
RAB40C-211ENST00000568586 TJAP1Q5JTD0 557 aa32.92■■■□□ 2.86
RAB40C-211ENST00000568586 NCAPH2Q6IBW4 605 aa32.92■■■□□ 2.86
RAB40C-211ENST00000568586 EXOC8Q8IYI6 725 aa32.92■■■□□ 2.86
RAB40C-211ENST00000568586 MRPL38Q96DV4 380 aaKnown RBP32.92■■■□□ 2.86
RAB40C-211ENST00000568586 DHX33Q9H6R0 707 aaKnown RBP32.92■■■□□ 2.86
RAB40C-211ENST00000568586 TTC12Q9H892 705 aaPredicted RBP32.92■■■□□ 2.86
RAB40C-211ENST00000568586 NPEPPSP55786 919 aa32.91■■■□□ 2.86
RAB40C-211ENST00000568586 PLA2G4FQ68DD2 849 aa32.91■■■□□ 2.86
RAB40C-211ENST00000568586 DYDC2Q96IM9 177 aa32.91■■■□□ 2.86
RAB40C-211ENST00000568586 ASB2Q96Q27 587 aa32.91■■■□□ 2.86
RAB40C-211ENST00000568586 ELAC1Q9H777 363 aaKnown RBP32.91■■■□□ 2.86
RAB40C-211ENST00000568586 YWHABP31946 246 aaKnown RBP32.9■■■□□ 2.86
RAB40C-211ENST00000568586 MRPS5P82675 430 aaKnown RBP32.9■■■□□ 2.86
RAB40C-211ENST00000568586 GPM6BQ13491 265 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 ZNF410Q86VK4 478 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 ZNF579Q8NAF0 562 aaKnown RBP32.9■■■□□ 2.86
RAB40C-211ENST00000568586 FAM184AQ8NB25 1140 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 EIF2AK1Q9BQI3 630 aaKnown RBP32.9■■■□□ 2.86
RAB40C-211ENST00000568586 PLVAPQ9BX97 442 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 TMEM60Q9H2L4 133 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 SUCLA2Q9P2R7 463 aaPredicted RBP32.9■■■□□ 2.86
RAB40C-211ENST00000568586 COG5Q9UP83 839 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 PCDHB7Q9Y5E2 793 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 NLRC5Q86WI3 1866 aa32.9■■■□□ 2.86
RAB40C-211ENST00000568586 RFC5P40937 340 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 PTPROQ16827 1216 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 OTUD6AQ7L8S5 288 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 NEK9Q8TD19 979 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 CEP170P1Q96L14 293 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 TBC1D32Q96NH3 1257 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 LRFN2Q9ULH4 789 aa32.89■■■□□ 2.86
RAB40C-211ENST00000568586 TXKP42681 527 aa32.88■■■□□ 2.85
RAB40C-211ENST00000568586 NOSTRINQ8IVI9 506 aa32.88■■■□□ 2.85
RAB40C-211ENST00000568586 NLRP7Q8WX94 980 aa32.88■■■□□ 2.85
RAB40C-211ENST00000568586 SLC7A3Q8WY07 619 aa32.88■■■□□ 2.85
RAB40C-211ENST00000568586 SYMPKQ92797 1274 aaKnown RBP32.88■■■□□ 2.85
RAB40C-211ENST00000568586 C11orf84Q9BUA3 381 aaPredicted RBP32.88■■■□□ 2.85
RAB40C-211ENST00000568586 GCOM2Q9BZD3 368 aaPredicted RBP32.88■■■□□ 2.85
RAB40C-211ENST00000568586 TMEM161AQ9NX61 479 aa32.88■■■□□ 2.85
RAB40C-211ENST00000568586 MRPL42Q9Y6G3 142 aaKnown RBP32.88■■■□□ 2.85
RAB40C-211ENST00000568586 U2AF2P26368 475 aaKnown RBP eCLIP32.87■■■□□ 2.85
RAB40C-211ENST00000568586 CTNNB1P35222 781 aa32.87■■■□□ 2.85
RAB40C-211ENST00000568586 TRAPPC10P48553 1259 aa32.87■■■□□ 2.85
RAB40C-211ENST00000568586 CTTNQ14247 550 aaKnown RBP32.87■■■□□ 2.85
RAB40C-211ENST00000568586 ZNF668Q96K58 619 aaPredicted RBP32.87■■■□□ 2.85
RAB40C-211ENST00000568586 BRWD1Q9NSI6 2320 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 GAS2O43903 313 aaKnown RBP32.86■■■□□ 2.85
RAB40C-211ENST00000568586 MCM7P33993 719 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 CYP4A11Q02928 519 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 NAALADL2Q58DX5 795 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 TPH2Q8IWU9 490 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 P2RX5Q93086 422 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 TMX3Q96JJ7 454 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 LMAN2LQ9H0V9 348 aa32.86■■■□□ 2.85
RAB40C-211ENST00000568586 ZBTB39O15060 712 aa32.85■■■□□ 2.85
RAB40C-211ENST00000568586 CD2BP2O95400 341 aaKnown RBP32.85■■■□□ 2.85
RAB40C-211ENST00000568586 ZSCAN20P17040 1043 aaPredicted RBP32.85■■■□□ 2.85
RAB40C-211ENST00000568586 GATMP50440 423 aa32.85■■■□□ 2.85
RAB40C-211ENST00000568586 SKIV2LQ15477 1246 aaKnown RBP32.85■■■□□ 2.85
RAB40C-211ENST00000568586 SCLT1Q96NL6 688 aa32.85■■■□□ 2.85
RAB40C-211ENST00000568586 INO80BQ9C086 356 aaPredicted RBP32.85■■■□□ 2.85
RAB40C-211ENST00000568586 CHST12Q9NRB3 414 aa32.85■■■□□ 2.85
RAB40C-211ENST00000568586 A0A087WZ62 844 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 MCM2P49736 904 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 POLGP54098 1239 aaPredicted RBP32.84■■■□□ 2.85
RAB40C-211ENST00000568586 RHPN2Q8IUC4 686 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 FDXACB1Q9BRP7 624 aaPredicted RBP32.84■■■□□ 2.85
RAB40C-211ENST00000568586 TRAIPQ9BWF2 469 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 ATP6V0A4Q9HBG4 840 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 IFT122Q9HBG6 1241 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 ANKEF1Q9NU02 776 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 MUC3AQ02505 3323 aa32.84■■■□□ 2.85
RAB40C-211ENST00000568586 XRCC6P12956 609 aaKnown RBP eCLIP32.83■■■□□ 2.85
RAB40C-211ENST00000568586 ATP2B1P20020 1258 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 AAK1Q2M2I8 961 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 TIGD5Q53EQ6 642 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 XKR9Q5GH70 373 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 FAM102BQ5T8I3 360 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 HLA-CQ95604 372 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 COL4A3BPQ9Y5P4 624 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 NCOR1O75376 2440 aa32.83■■■□□ 2.85
RAB40C-211ENST00000568586 A0A0U1RQF3 1178 aa32.82■■■□□ 2.84
RAB40C-211ENST00000568586 KSR1Q8IVT5 923 aa32.82■■■□□ 2.84
RAB40C-211ENST00000568586 PRPF31Q8WWY3 499 aaKnown RBP32.82■■■□□ 2.84
RAB40C-211ENST00000568586 KIF3AQ9Y496 699 aa32.82■■■□□ 2.84
RAB40C-211ENST00000568586 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP32.81■■■□□ 2.84
RAB40C-211ENST00000568586 GRM6O15303 877 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 CSDE1O75534 798 aaKnown RBP32.81■■■□□ 2.84
RAB40C-211ENST00000568586 SPATA31C1P0DKV0 1188 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 FGFR4P22455 802 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 SFPQP23246 707 aaKnown RBP eCLIP32.81■■■□□ 2.84
RAB40C-211ENST00000568586 TFF2Q03403 129 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 EMC2Q15006 297 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 ZNF174Q15697 407 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 PAN2Q504Q3 1202 aaKnown RBP32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms